s_460584 (Phytophthora sojae)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 s_460584 T14842_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
s_460584 CCHC ZF 238 255

Links

Other CCHC ZF family RBPs
Other Phytophthora sojae RBPs

11 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
s_467293 Phytophthora sojae s_467293 N 0.889
nasonia_NCBI_hmm340794 Nasonia vitripennis nasonia_NCBI_hmm340794 N 0.722
nasonia_NCBI_hmm34574 Nasonia vitripennis nasonia_NCBI_hmm34574 N 0.722
DDB_G0294338 Dictyostelium discoideum DDB_G0294338 N 0.722
mgf026099m Mimulus guttatus mgf026099m N 0.722
nasonia_NCBI_hmm336794 Nasonia vitripennis nasonia_NCBI_hmm336794 N 0.722
nasonia_NCBI_hmm280424 Nasonia vitripennis nasonia_NCBI_hmm280424 N 0.722
s_476971 Phytophthora sojae s_476971 N 0.722
nasonia_NCBI_hmm118164 Nasonia vitripennis nasonia_NCBI_hmm118164 N 0.722
nasonia_NCBI_hmm139164 Nasonia vitripennis nasonia_NCBI_hmm139164 N 0.722
nasonia_NCBI_hmm253074 Nasonia vitripennis nasonia_NCBI_hmm253074 N 0.722