CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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EFA75926.1
(
Polysphondylium pallidum
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
EFA75926.1
T15058_0.6
NCBI (2013-Jan-11)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFA75926.1
CCHC ZF
217
234
GSCFKCGQPGHFRKDCPL
Links
Other
CCHC ZF
family RBPs
Other
Polysphondylium pallidum
RBPs
7 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ppa026182m
Prunus persica
ppa026182m
N
0.778
ppa021588m
Prunus persica
ppa021588m
N
0.778
cassava45172.m1
Manihot esculenta
cassava45172.m1
N
0.722
ppa024392m
Prunus persica
ppa024392m
N
0.722
ppa022673m
Prunus persica
ppa022673m
N
0.722
ppa016726m
Prunus persica
ppa016726m
N
0.722
ppa016115m
Prunus persica
ppa016115m
N
0.722