CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Sjc_0087940
(
Schistosoma japonicum
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
Sjc_0087940
T15126_0.6
SDSPB (2008-Sep-5)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CPRT0000012525
CCHC ZF
50
67
GACFVCLKRGHRASDCKL
Links
Other
CCHC ZF
family RBPs
Other
Schistosoma japonicum
RBPs
9 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Sjc_0069260
Schistosoma japonicum
Sjc_0069260
N
0.889
Sjc_0072920
Schistosoma japonicum
Sjc_0072920
N
0.889
Sjc_0073190
Schistosoma japonicum
Sjc_0073190
N
0.889
Sjc_0110320
Schistosoma japonicum
Sjc_0110320
N
0.889
Sjc_0041920
Schistosoma japonicum
Sjc_0041920
N
0.889
Sjc_0049130
Schistosoma japonicum
Sjc_0049130
N
0.833
Sjc_0117630
Schistosoma japonicum
Sjc_0117630
N
0.833
Glyma20g22120.1
Glycine max
Glyma20g22120.1
N
0.722
Glyma10g28100.1
Glycine max
Glyma10g28100.1
N
0.722