CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Sjc_0049130
(
Schistosoma japonicum
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
Sjc_0049130
T15120_0.6
SDSPB (2008-Sep-5)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CPRT0000012461
CCHC ZF
244
261
GACFVCLKQGHRASECKS
Links
Other
CCHC ZF
family RBPs
Other
Schistosoma japonicum
RBPs
8 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Sjc_0110320
Schistosoma japonicum
Sjc_0110320
N
0.944
Sjc_0069260
Schistosoma japonicum
Sjc_0069260
N
0.944
Sjc_0073190
Schistosoma japonicum
Sjc_0073190
N
0.944
Sjc_0041920
Schistosoma japonicum
Sjc_0041920
N
0.944
Sjc_0072920
Schistosoma japonicum
Sjc_0072920
N
0.944
Sjc_0117630
Schistosoma japonicum
Sjc_0117630
N
0.889
Sjc_0087940
Schistosoma japonicum
Sjc_0087940
N
0.833
mgf008200m
Mimulus guttatus
mgf008200m
N
0.722