fgenesh1_pm.C_scaffold_20000204 (Phytophthora capsici)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 fgenesh1_pm.C_scaffold_20000204 T15445_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.C_scaffold_20000204 CCHC ZF 158 175

Links

Other CCHC ZF family RBPs
Other Phytophthora capsici RBPs

11 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pm.C_scaffold_21000250 Phytophthora capsici fgenesh1_pm.C_scaffold_21000250 N 0.778
gw1.25.115.1 Phytophthora capsici gw1.25.115.1 N 0.778
gw1.71.36.1 Phytophthora capsici gw1.71.36.1 N 0.778
gw1.25.112.1 Phytophthora capsici gw1.25.112.1 N 0.778
gw1.25.114.1 Phytophthora capsici gw1.25.114.1 N 0.778
gw1.25.111.1 Phytophthora capsici gw1.25.111.1 N 0.778
gw1.25.105.1 Phytophthora capsici gw1.25.105.1 N 0.778
gw1.25.107.1 Phytophthora capsici gw1.25.107.1 N 0.778
s_467047 Phytophthora sojae s_467047 N 0.722
PITG_06372 Phytophthora infestans PITG_06372 N 0.722
CJA09252 Caenorhabditis japonica CJA09252 N 0.722