gw1.71.36.1 (Phytophthora capsici)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 gw1.71.36.1 T15886_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
gw1.71.36.1 CCHC ZF 131 148

Links

Other CCHC ZF family RBPs
Other Phytophthora capsici RBPs

12 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
gw1.25.112.1 Phytophthora capsici gw1.25.112.1 N 1.000
gw1.25.114.1 Phytophthora capsici gw1.25.114.1 N 1.000
gw1.25.115.1 Phytophthora capsici gw1.25.115.1 N 1.000
gw1.25.111.1 Phytophthora capsici gw1.25.111.1 N 1.000
gw1.25.107.1 Phytophthora capsici gw1.25.107.1 N 1.000
fgenesh1_pm.C_scaffold_21000250 Phytophthora capsici fgenesh1_pm.C_scaffold_21000250 N 1.000
gw1.25.105.1 Phytophthora capsici gw1.25.105.1 N 1.000
s_467047 Phytophthora sojae s_467047 N 0.889
PITG_06372 Phytophthora infestans PITG_06372 N 0.833
fgenesh1_pm.C_scaffold_20000204 Phytophthora capsici fgenesh1_pm.C_scaffold_20000204 N 0.778
gw1.267.3.1 Phytophthora capsici gw1.267.3.1 N 0.722
gw1.267.2.1 Phytophthora capsici gw1.267.2.1 N 0.722