CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CBG24692
(
Caenorhabditis briggsae
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
CBG24692
T09595_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG24692
CCHC ZF
385
402
RECFYCGIPGHFARECRR
Links
Other
CCHC ZF
family RBPs
Other
Caenorhabditis briggsae
RBPs
8 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CJA17831
Caenorhabditis japonica
CJA17831
N
0.889
CJA28475
Caenorhabditis japonica
CJA28475
N
0.889
CJA05236
Caenorhabditis japonica
CJA05236
N
0.889
CJA15255
Caenorhabditis japonica
CJA15255
N
0.889
CJA09176
Caenorhabditis japonica
CJA09176
N
0.833
XP_001190095.1
Strongylocentrotus purpuratus
XP_001190095.1
N
0.722
XP_001178848.1
Strongylocentrotus purpuratus
XP_001178848.1
N
0.722
CJA10241
Caenorhabditis japonica
CJA10241
N
0.722