CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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YALI0E14388g2
(
Yarrowia lipolytica
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
YALI0E14388g2
T16429_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
YALI0E14388g2
CCHC ZF
217
234
RECYTCGKIGHLARDCRH
Links
Other
CCHC ZF
family RBPs
Other
Yarrowia lipolytica
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
YALI0E14388g1
Yarrowia lipolytica
YALI0E14388g1
N
1.000
LOC_Os11g35630
Oryza sativa
LOC_Os11g35630
N
0.722