CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CAOG_08341
(
Capsaspora owczarzaki
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
CAOG_08341
T17552_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CAOG_08341T0
KH
217
258
DGSGGKTKFTIENVTKTRIVVADSKIHILGSFQNIKVSRDAI
Links
Other
KH
family RBPs
Other
Capsaspora owczarzaki
RBPs
15 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CAOG_07410
Capsaspora owczarzaki
CAOG_07410
N
1.000
XP_002162789.1
Hydra magnipapillata
XP_002162789.1
N
0.720
XP_791733.2
Strongylocentrotus purpuratus
XP_791733.2
N
0.700
XP_798188.2
Strongylocentrotus purpuratus
XP_798188.2
N
0.700
AAQ24169
Xenopus laevis
AAQ24169
N
0.700
Q8AVH4
Xenopus laevis
Q8AVH4
N
0.700
AAH42279
Xenopus laevis
AAH42279
N
0.700
XP_001202160.1
Strongylocentrotus purpuratus
XP_001202160.1
N
0.700
PNO1
Meleagris gallopavo
ENSMGAG00000004514
N
0.700
PNO1_CHICK
Gallus gallus
ENSGALG00000009093
N
0.700
Q6VBQ6_ORYLA
Oryzias latipes
ENSORLG00000002371
N
0.700
pno1
Xenopus tropicalis
ENSXETG00000017349
N
0.700
XP_001202155.1
Strongylocentrotus purpuratus
XP_001202155.1
N
0.700
fgeneshTA2_pg.C_scaffold_14000176
Trichoplax adhaerens
fgeneshTA2_pg.C_scaffold_14000176
N
0.700
pno1
Danio rerio
ENSDARG00000008502
N
0.700