XP_001202155.1 (Strongylocentrotus purpuratus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 XP_001202155.1 T22051_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
XP_001202155.1 KH 175 224

Links

Other KH family RBPs
Other Strongylocentrotus purpuratus RBPs

251 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XP_001202160.1 Strongylocentrotus purpuratus XP_001202160.1 N 1.000
XP_791733.2 Strongylocentrotus purpuratus XP_791733.2 N 1.000
XP_798188.2 Strongylocentrotus purpuratus XP_798188.2 N 1.000
pno1 Danio rerio ENSDARG00000008502 N 0.980
Q6VBQ6_ORYLA Oryzias latipes ENSORLG00000002371 N 0.980
fgenesh1_pg.scaffold_18000119 Nematostella vectensis fgenesh1_pg.scaffold_18000119 N 0.960
fgenesh2_pg.scaffold_196000015 Branchiostoma floridae fgenesh2_pg.scaffold_196000015 N 0.960
PNO1 Tetraodon nigroviridis ENSTNIG00000009825 N 0.960
PNO1 Taeniopygia guttata ENSTGUG00000002369 N 0.960
PNO1 Takifugu rubripes ENSTRUG00000012470 N 0.960
fgenesh2_pm.scaffold_78000001 Branchiostoma floridae fgenesh2_pm.scaffold_78000001 N 0.960
XP_002162789.1 Hydra magnipapillata XP_002162789.1 N 0.960
pno1 Xenopus tropicalis ENSXETG00000017349 N 0.940
PNO1 Gasterosteus aculeatus ENSGACG00000012047 N 0.940
PNO1 Meleagris gallopavo ENSMGAG00000004514 N 0.940
PNO1_CHICK Gallus gallus ENSGALG00000009093 N 0.940
AAH42279 Xenopus laevis AAH42279 N 0.940
Q8AVH4 Xenopus laevis Q8AVH4 N 0.940
AAQ24169 Xenopus laevis AAQ24169 N 0.940
PNO1 Myotis lucifugus ENSMLUG00000010850 N 0.920
PNO1 Gorilla gorilla ENSGGOG00000009158 N 0.920
XM_001095777.1 Macaca mulatta ENSMMUG00000030357 N 0.920
Q7YRC8_MACMU Macaca mulatta ENSMMUG00000017461 N 0.920
PNO1 Loxodonta africana ENSLAFG00000000046 N 0.920
PNO1 Macropus eugenii ENSMEUG00000004504 N 0.920
PNO1 Microcebus murinus ENSMICG00000010897 N 0.920
PNO1 Erinaceus europaeus ENSEEUG00000009611 N 0.920
LOC100389955 Callithrix jacchus ENSCJAG00000006564 N 0.920
PNO1 Canis familiaris ENSCAFG00000003256 N 0.920
PNO1_BOVIN Bos taurus ENSBTAG00000010604 N 0.920
PNO1 Cavia porcellus ENSCPOG00000010130 N 0.920
Pno1 Dipodomys ordii ENSDORG00000006867 N 0.920
PNO1 Monodelphis domestica ENSMODG00000003567 N 0.920
LOC100061904 Equus caballus ENSECAG00000011263 N 0.920
PNO1 Homo sapiens ENSG00000115946 N 0.920
PNO1 Ochotona princeps ENSOPRG00000009643 N 0.920
PNO1 Pteropus vampyrus ENSPVAG00000012695 N 0.920
PNO1 Pan troglodytes ENSPTRG00000011999 N 0.920
ENSPPYG00000012353 Pongo pygmaeus ENSPPYG00000012353 N 0.920
Pno1 Rattus norvegicus ENSRNOG00000005524 N 0.920
PNO1 Sus scrofa ENSSSCG00000008352 N 0.920
Ame_R013855 Ailuropoda melanoleuca Ame_R013855 N 0.920
PNO1 Vicugna pacos ENSVPAG00000012083 N 0.920
PNO1 Procavia capensis ENSPCAG00000016146 N 0.920
PNO1 Tursiops truncatus ENSTTRG00000014002 N 0.920
ENSOCUG00000006100 Oryctolagus cuniculus ENSOCUG00000006100 N 0.920
PNO1 Anolis carolinensis ENSACAG00000001218 N 0.920
ENSOCUG00000022236 Oryctolagus cuniculus ENSOCUG00000022236 N 0.920
PNO1 Ornithorhynchus anatinus ENSOANG00000008388 N 0.920
fgeneshTA2_pg.C_scaffold_14000176 Trichoplax adhaerens fgeneshTA2_pg.C_scaffold_14000176 N 0.900
Pno1 Mus musculus ENSMUSG00000020116 N 0.900
estExt_Genewise1.C_5820041 Capitella teleta estExt_Genewise1.C_5820041 N 0.900
nasonia_NCBI_hmm120183 Nasonia vitripennis nasonia_NCBI_hmm120183 N 0.880
ENSCJAG00000022611 Callithrix jacchus ENSCJAG00000022611 N 0.880
DGIL_AUG5s4501g8t1 Acyrtosiphon pisum DGIL_AUG5s4501g8t1 N 0.880
fgenesh3_pm.54__15 Postia placenta fgenesh3_pm.54__15 N 0.880
RO3G_00885 Rhizopus oryzae RO3G_00885 N 0.880
RO3G_05288 Rhizopus oryzae RO3G_05288 N 0.880
e_gww2.1.865.1 Phanerochaete chrysosporium e_gww2.1.865.1 N 0.880
XM_001110046.1 Macaca mulatta ENSMMUG00000003556 N 0.880
e_gw1.12.287.1 Serpula lacrymans e_gw1.12.287.1 N 0.860
gw1.1.2472.1 Pleurotus ostreatus gw1.1.2472.1 N 0.860
ENSCING00000009577 Ciona intestinalis ENSCING00000009577 N 0.860
estExt_Genewise1Plus.C_10658 Mucor circinelloides estExt_Genewise1Plus.C_10658 N 0.860
amel4_ncbi_hmm14037 Apis mellifera amel4_ncbi_hmm14037 N 0.860
ENSCSAVG00000001303 Ciona savignyi ENSCSAVG00000001303 N 0.860
GK20148 Drosophila willistoni FBgn0222145 N 0.843
e_gw1.2.756.1 Heterobasidion annosum e_gw1.2.756.1 N 0.840
fgenesh1_pg.C_scaffold_107000027 Daphnia pulex fgenesh1_pg.C_scaffold_107000027 N 0.840
BGIBMGA014064 Bombyx mori BGIBMGA014064 N 0.840
cassava30594.valid.m1 Manihot esculenta cassava30594.valid.m1 N 0.840
estExt_fgenesh2_kg.C_20130 Agaricus bisporus estExt_fgenesh2_kg.C_20130 N 0.840
estExt_Genewise1Plus.C_250095 Phycomyces blakesleeanus estExt_Genewise1Plus.C_250095 N 0.840
e_gwh1.2.512.1 Laccaria bicolor e_gwh1.2.512.1 N 0.840
GJ15820 Drosophila virilis FBgn0203007 N 0.824
GA11169-RA Drosophila pseudoobscura FBgn0071224 N 0.824
GH12628 Drosophila grimshawi FBgn0120107 N 0.824
B9N5M8_POPTR Populus trichocarpa POPTR_0011s16880 N 0.820
e_gw1.2.2126.1 Schizophyllum commune e_gw1.2.2126.1 N 0.820
28525.m000262 Ricinus communis 28525.m000262 N 0.820
estExt_fgenesh2_pm.C_sca_70005 Lottia gigantea estExt_fgenesh2_pm.C_sca_70005 N 0.820
B9GHH7_POPTR Populus trichocarpa POPTR_0001s47320 N 0.820
estExt_fgenesh1_pg.C_110137 Monosiga brevicollis estExt_fgenesh1_pg.C_110137 N 0.820
cassava7030.valid.m1 Manihot esculenta cassava7030.valid.m1 N 0.820
Medtr3g080390 Medicago truncatula Medtr3g080390 N 0.820
e_gw1.15.315.1 Tremella mesenterica e_gw1.15.315.1 N 0.820
GP3.070330 Batrachochytrium dendrobatidis GP3.070330 N 0.820
GF20246 Drosophila ananassae FBgn0097253 N 0.804
GG19285 Drosophila erecta FBgn0111489 N 0.804
GE17874 Drosophila yakuba FBgn0068478 N 0.804
GI11042 Drosophila mojavensis FBgn0133805 N 0.804
GD17488 Drosophila simulans FBgn0189040 N 0.804
l(1)G0004 Drosophila melanogaster FBgn0027334 N 0.804
GM23025 Drosophila sechellia FBgn0177893 N 0.804
Chlre2_kg.scaffold_20000177 Chlamydomonas reinhardtii Chlre2_kg.scaffold_20000177 N 0.800
PHUM356890 Pediculus humanus PHUM356890 N 0.800
estExt_Genewise1Plus.C_600117 Volvox carteri estExt_Genewise1Plus.C_600117 N 0.800
MDP0000136407 Malus x domestica MDP0000136407 N 0.800
MDP0000120063 Malus x domestica MDP0000120063 N 0.800
Genemark1.5719_g Coccomyxa C 169 Genemark1.5719_g N 0.800
MDP0000265633 Malus x domestica MDP0000265633 N 0.800
MDP0000754021 Malus x domestica MDP0000754021 N 0.800
ppa011086m Prunus persica ppa011086m N 0.800
ppa009897m Prunus persica ppa009897m N 0.800
fgeneshCV_pg.C_scaffold_11000142 Chlorella vulgaris fgeneshCV_pg.C_scaffold_11000142 N 0.800
AMAG_12889 Allomyces macrogynus AMAG_12889 N 0.800
Bm1_42995 Brugia malayi Bm1_42995 N 0.800
estExt_Genewise1.C_260084 Melampsora laricis populina estExt_Genewise1.C_260084 N 0.800
AMAG_14219 Allomyces macrogynus AMAG_14219 N 0.800
Glyma08g44800.1 Glycine max Glyma08g44800.1 N 0.800
Glyma18g08100.1 Glycine max Glyma18g08100.1 N 0.800
Glyma18g08080.1 Glycine max Glyma18g08080.1 N 0.800
Cucsa.041830 Cucumis sativus Cucsa.041830 N 0.800
Cucsa.201760 Cucumis sativus Cucsa.201760 N 0.800
LOAG_05624 Loa loa LOAG_05624 N 0.800
WUBG_12774 Wuchereria bancrofti WUBG_12774 N 0.800
PK08146.1 Cannabis sativa PK08146.1 N 0.800
PTTG_01898 Puccinia triticina PTTG_01898 N 0.780
pno1 Dictyostelium discoideum DDB_G0287557 N 0.780
LjSGA_017760.2 Lotus japonicus LjSGA_017760.2 N 0.780
GID1.0042265 Dictyostelium purpureum GID1.0042265 N 0.780
Scas_Contig632.19 Saccharomyces castellii Scas_Contig632.19 N 0.780
EFA79428.1 Polysphondylium pallidum EFA79428.1 N 0.780
PNO1_IXOSC Ixodes scapularis ISCW023560 N 0.780
GSTUMT00003923001 Tuber melanosporum GSTUMT00003923001 N 0.780
estExt_fgenesh1_kg.C_140013 Cochliobolus heterostrophus C5 estExt_fgenesh1_kg.C_140013 N 0.780
fgenesh1_pm.C_scaffold_5000030 Phytophthora ramorum fgenesh1_pm.C_scaffold_5000030 N 0.760
SPRG_02415 Saprolegnia parasitica SPRG_02415 N 0.760
e_gw1.4.614.1 Micromonas pusilla e_gw1.4.614.1 N 0.760
e_gw1.7.528.1 Ostreococcus RCC809 e_gw1.7.528.1 N 0.760
PITG_01680 Phytophthora infestans PITG_01680 N 0.760
CTRG_05813 Candida tropicalis CTRG_05813 N 0.760
s_468317 Phytophthora sojae s_468317 N 0.760
orf19.7618 Candida albicans orf19.7618 N 0.760
mgf006621m Mimulus guttatus mgf006621m N 0.760
e_gw1.8.261.1 Sporobolomyces roseus e_gw1.8.261.1 N 0.760
e_gwEuk.7.409.1 Ostreococcus lucimarinus e_gwEuk.7.409.1 N 0.760
estExt_Genewise1Plus.C_10659 Myceliophthora thermophila estExt_Genewise1Plus.C_10659 N 0.760
YALI0E01122g Yarrowia lipolytica YALI0E01122g N 0.760
CLUG_01545 Candida lusitaniae CLUG_01545 N 0.760
estExt_genewise1_human.C_chr_1.20929 Pichia stipitis estExt_genewise1_human.C_chr_1.20929 N 0.760
CNBG_1323 Cryptococcus neoformans CNBG_1323 N 0.760
SAKL0G03740g Lachancea kluyveri SAKL0G03740g N 0.760
PTSG_04415 Salpingoeca rosetta PTSG_04415 N 0.760
DEHA0G05258g Debaryomyces hansenii DEHA0G05258g N 0.760
BRADI2G52180 Brachypodium distachyon BRADI2G52180 N 0.760
GRMZM2G085005 Zea mays GRMZM2G085005 N 0.760
GRMZM2G139198 Zea mays GRMZM2G139198 N 0.760
XM_002882767.1 Arabidopsis lyrata scaffold_301521.1 N 0.760
rbp28 Schizosaccharomyces pombe SPAC2C4.11c N 0.760
CPAG_01545 Candida parapsilosis CPAG_01545 N 0.760
ZYRO0D11440g Zygosaccharomyces rouxii ZYRO0D11440g N 0.760
SB03G036840 Sorghum bicolor Sb03g036840 N 0.760
AT3G13230 Arabidopsis thaliana AT3G13230-TAIR-G N 0.760
LOC_Os01g57910 Oryza sativa LOC_Os01g57910 N 0.760
LOC_Os03g02420 Oryza sativa LOC_Os03g02420 N 0.760
LELG_05249 Lodderomyces elongisporus LELG_05249 N 0.760
BGIOSIBCE009391 Oryza indica BGIOSIBCE009391 N 0.760
Cd36_35296 Candida dubliniensis Cd36_35296 N 0.760
CAGL0K09460g Candida glabrata CAGL0K09460g N 0.760
PDK_20s1554761g001 Phoenix dactylifera PDK_20s1554761g001 N 0.760
A7THL8_VANPO Vanderwaltozyma polyspora A7THL8_VANPO N 0.760
20872_YOR145C Saccharomyces paradoxus 20872_YOR145C N 0.740
estExt_fgenesh1_pg.C_190237 Phytophthora capsici estExt_fgenesh1_pg.C_190237 N 0.740
SPOG_00402 Schizosaccharomyces cryophilus SPOG_00402 N 0.740
0700010277 Ostreococcus tauri 0700010277 N 0.740
KLLA0C06446g Kluyveromyces lactis KLLA0C06446g N 0.740
CpipJ_CPIJ019677 Culex pipiens CpipJ_CPIJ019677 N 0.740
CPSG_08784 Coccidioides posadasii CPSG_08784 N 0.740
23888_YOR145C Saccharomyces bayanus 23888_YOR145C N 0.740
3712.m00082 Tetrahymena thermophila 3712.m00082 N 0.740
BC1G_12211 Botrytis cinerea BC1G_12211 N 0.740
fgenesh1_kg.C_scaffold_5000048 Selaginella moellendorfii fgenesh1_kg.C_scaffold_5000048 N 0.740
SS1G_04290 Sclerotinia sclerotiorum SS1G_04290 N 0.740
GSPATP00021981001 Paramecium tetraurelia GSPATP00021981001 N 0.740
CpipJ_CPIJ015853 Culex pipiens CpipJ_CPIJ015853 N 0.740
GSPATP00020703001 Paramecium tetraurelia GSPATP00020703001 N 0.740
Skud_Contig1833.8 Saccharomyces kudriavzevii Skud_Contig1833.8 N 0.740
estExt_Genewise1.C_10689 Thielavia terrestris estExt_Genewise1.C_10689 N 0.740
EHI_065870 Entamoeba histolytica EHI_065870 N 0.740
PGUG_02960 Candida guilliermondii PGUG_02960 N 0.740
CJA15618 Caenorhabditis japonica CJA15618 N 0.740
EDI_198550 Entamoeba dispar EDI_198550 N 0.740
PNO1 Ashbya gossypii PNO1 N 0.740
PDK_20s1552091g001 Phoenix dactylifera PDK_20s1552091g001 N 0.740
Minc08810 Meloidogyne incognita Minc08810 N 0.740
Minc09852 Meloidogyne incognita Minc09852 N 0.740
Pc14g01220 Penicillium chrysogenum Pc14g01220 N 0.740
PNO1 Saccharomyces cerevisiae YOR145C N 0.740
e_gw1.18.222.1 Chlorella NC64A e_gw1.18.222.1 N 0.740
CPIJ015853 Culex quinquefasciatus CPIJ015853 N 0.740
Kwal_18864 Kluyveromyces waltii Kwal_18864 N 0.740
KLTH0G02574g Kluyveromyces thermotolerans KLTH0G02574g N 0.740
estExt_fgeneshHS_pm.C_280002 Naegleria gruberi estExt_fgeneshHS_pm.C_280002 N 0.740
CIMG_07268 Coccidioides immitis CIMG_07268 N 0.740
SNAPOd2T00014997001 Oikopleura dioica SNAPOd2T00014997001 N 0.740
e_gw1.226.39.1 Physcomitrella patens e_gw1.226.39.1 N 0.740
CPIJ019677 Culex quinquefasciatus CPIJ019677 N 0.740
PPA25260 Pristionchus pacificus PPA25260 N 0.740
SNAPOd2T00029081001 Oikopleura dioica SNAPOd2T00029081001 N 0.740
20359_YOR145C Saccharomyces mikatae 20359_YOR145C N 0.725
UREG_07832 Uncinocarpus reesii UREG_07832 N 0.720
CRE05188 Caenorhabditis remanei CRE05188 N 0.720
EDP42908.1 Malassezia globosa EDP42908.1 N 0.720
HCAG_04100 Histoplasma capsulatum HCAG_04100 N 0.720
MCYG_07269 Microsporum canis MCYG_07269 N 0.720
Y53C12B.2 Caenorhabditis elegans Y53C12B.2 N 0.720
Medtr5g095530 Medicago truncatula Medtr5g095530 N 0.720
CBN06104 Caenorhabditis brenneri CBN06104 N 0.720
ARB_00984 Arthroderma benhamiae ARB_00984 N 0.720
TEQG_07954 Trichophyton equinum TEQG_07954 N 0.720
TERG_01665 Trichophyton rubrum TERG_01665 N 0.720
e_gw1.13.100.1 Volvox carteri e_gw1.13.100.1 N 0.720
BDBG_01721 Blastomyces dermatitidis BDBG_01721 N 0.720
e_gw1.3.1059.1 Mycosphaerella fijiensis e_gw1.3.1059.1 N 0.720
SPPG_04498 Spizellomyces punctatus SPPG_04498 N 0.720
PTRG_02803 Pyrenophora tritici repentis PTRG_02803 N 0.720
UM03495 Ustilago maydis UM03495 N 0.720
TESG_04215 Trichophyton tonsurans TESG_04215 N 0.720
SNOG_03777 Stagonospora nodorum SNOG_03777 N 0.720
194870 Helobdella robusta 194870 N 0.720
EAT88982.1 Phaeosphaeria nodorum EAT88982.1 N 0.720
MGYG_04767 Microsporum gypseum MGYG_04767 N 0.720
mgf019585m Mimulus guttatus mgf019585m N 0.720
TRV_03730 Trichophyton verrucosum TRV_03730 N 0.720
CBG01042 Caenorhabditis briggsae CBG01042 N 0.720
estExt_Genewise1Plus.C_chr_70397 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_70397 N 0.720
PMAA_046470 Penicillium marneffei PMAA_046470 N 0.700
SOCG_04140 Schizosaccharomyces octosporus SOCG_04140 N 0.700
PBANKA_133250 Plasmodium berghei PBANKA_133250 N 0.700
PCHAS_133710 Plasmodium chabaudi PCHAS_133710 N 0.700
PF14_0661 Plasmodium falciparum PF14_0661 N 0.700
PKH_123590 Plasmodium knowlesi PKH_123590 N 0.700
LmjF35.3540 Leishmania major LmjF35.3540 N 0.700
LinJ35_V3.3590 Leishmania infantum LinJ35_V3.3590 N 0.700
FGSG_01345 Fusarium graminearum FGSG_01345 N 0.700
FOXG_00036 Fusarium oxysporum FOXG_00036 N 0.700
FVEG_01480 Fusarium verticillioides FVEG_01480 N 0.700
LbrM34_V2.3470 Leishmania braziliensis LbrM34_V2.3470 N 0.700
PVX_117000 Plasmodium vivax PVX_117000 N 0.700
PY03646 Plasmodium yoelii PY03646 N 0.700
CAOG_08341 Capsaspora owczarzaki CAOG_08341 N 0.700
CAOG_07410 Capsaspora owczarzaki CAOG_07410 N 0.700
estExt_Genewise1Plus.C_91132 Trichoderma virens estExt_Genewise1Plus.C_91132 N 0.700
fgenesh1_pm.C_scaffold_14000035 Trichoderma atroviride fgenesh1_pm.C_scaffold_14000035 N 0.700
estExt_fgenesh5_pg.C_40050 Trichoderma reesei estExt_fgenesh5_pg.C_40050 N 0.700
SJAG_03872 Schizosaccharomyces japonicus SJAG_03872 N 0.700
27316 Aureococcus anophagefferens 27316 N 0.700
PABG_01374 Paracoccidioides brasiliensis PABG_01374 N 0.700
estExt_fgenesh1_pg.C_sca_1_chr1_3_00036 Nectria haematococca estExt_fgenesh1_pg.C_sca_1_chr1_3_00036 N 0.700
AAEL011832 Aedes aegypti AAEL011832 N 0.700