CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CNBG_0752
(
Cryptococcus neoformans
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
CNBG_0752
T17581_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CNBG_0752T0
KH
27
74
GKSGATIAAIRDSTGVKAGVSKVVQGVQDRVLSVTGDLEGVASAYAEV
CNBG_0752T0
KH
98
161
SIRLLISHNLMGTVIGRSGLKIKQIQDMSGARMVASKEMLPQSTERVVEVQGSVDAIKTAVLEI
CNBG_0752T0
KH
256
319
TQNISIPSDMVGCIIGRGGSKITEIRRLSGSRISIAKVPHDETGERMFTIQGTPEATERALMLL
Links
Other
KH
family RBPs
Other
Cryptococcus neoformans
RBPs
15 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
fgeneshTM_pg.13_#_145
Tremella mesenterica
fgeneshTM_pg.13_#_145
I
0.791
UM03654
Ustilago maydis
UM03654
I
0.770
estExt_fgeneshMC_pm.C_50126
Mucor circinelloides
estExt_fgeneshMC_pm.C_50126
I
0.738
e_gwh1.1.1236.1
Laccaria bicolor
e_gwh1.1.1236.1
I
0.728
estExt_Genewise1.C_440040
Phycomyces blakesleeanus
estExt_Genewise1.C_440040
I
0.728
CC1G_06779
Coprinopsis cinerea
CC1G_06779
I
0.723
PGTG_14860
Puccinia graminis
PGTG_14860
N
0.719
estExt_Genewise1Plus.C_560144
Postia placenta
estExt_Genewise1Plus.C_560144
I
0.717
estExt_fgenesh2_pm.C_10587
Agaricus bisporus
estExt_fgenesh2_pm.C_10587
I
0.707
BDBG_04961
Blastomyces dermatitidis
BDBG_04961
I
0.702
PABG_02940
Paracoccidioides brasiliensis
PABG_02940
I
0.702
estExt_fgenesh2_kg.C_10919
Serpula lacrymans
estExt_fgenesh2_kg.C_10919
I
0.702
HCAG_06295
Histoplasma capsulatum
HCAG_06295
I
0.702
An07g07150
Aspergillus niger
CADANGAG00005988
I
0.702
fgenesh1_pg.00009_#_201
Aspergillus carbonarius
fgenesh1_pg.00009_#_201
I
0.702