CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
BDBG_04961
(
Blastomyces dermatitidis
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
BDBG_04961
T17520_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
ANIA_04546
M226_0.6
Aspergillus nidulans
ACCYMA
RNAcompete
Ray et al.(2013)
RNCMPT00265
0.937
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
BDBG_04961T0
KH
45
107
TLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTAKAYAIV
BDBG_04961T0
KH
131
194
PVRLLISHNQMGTIIGRQGLKIKYIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWEI
BDBG_04961T0
KH
283
346
TQNISIPSDMVGCIIGRGGSKISEIRRSSGARISIAKAPHDETGERMFTIMGSAAANEKALYLL
Links
Other
KH
family RBPs
Other
Blastomyces dermatitidis
RBPs
66 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
HCAG_06295
Histoplasma capsulatum
HCAG_06295
I
1.000
PABG_02940
Paracoccidioides brasiliensis
PABG_02940
I
0.995
UREG_06886
Uncinocarpus reesii
UREG_06886
I
0.979
MCYG_00862
Microsporum canis
MCYG_00862
I
0.963
MGYG_01105
Microsporum gypseum
MGYG_01105
I
0.963
TEQG_01493
Trichophyton equinum
TEQG_01493
I
0.963
AFUA_2G02780
Aspergillus fumigatus
CADAFUAG00003337
I
0.963
TERG_00415
Trichophyton rubrum
TERG_00415
I
0.963
NFIA_035170
Neosartorya fischeri
CADNFIAG00003466
I
0.963
CIMG_01955
Coccidioides immitis
CIMG_01955
I
0.963
TRV_06814
Trichophyton verrucosum
TRV_06814
I
0.963
ACLA_092010
Aspergillus clavatus
CADACLAG00008508
I
0.963
ARB_05593
Arthroderma benhamiae
ARB_05593
I
0.963
TESG_02394
Trichophyton tonsurans
TESG_02394
I
0.963
PMAA_044720
Penicillium marneffei
PMAA_044720
I
0.958
ATEG_09612
Aspergillus terreus
CADATEAG00005390
I
0.953
An07g07150
Aspergillus niger
CADANGAG00005988
I
0.948
AO090026000625
Aspergillus oryzae
CADAORAG00008641
I
0.948
AFLA_133290
Aspergillus flavus
CADAFLAG00007208
I
0.948
fgenesh1_pg.00009_#_201
Aspergillus carbonarius
fgenesh1_pg.00009_#_201
I
0.948
ANIA_04546
Aspergillus nidulans
CADANIAG00005892
D
0.937
Pc18g04820
Penicillium chrysogenum
Pc18g04820
I
0.937
SNOG_14668
Stagonospora nodorum
SNOG_14668
I
0.901
AB04126.1
Alternaria brassicicola
AB04126.1
I
0.901
estExt_Genewise1Plus.C_11417
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_11417
I
0.901
EAT77860.2
Phaeosphaeria nodorum
EAT77860.2
I
0.895
PTRG_00277
Pyrenophora tritici repentis
PTRG_00277
I
0.895
estExt_fgenesh1_pm.C_10552
Mycosphaerella fijiensis
estExt_fgenesh1_pm.C_10552
I
0.885
e_gw1.3.1586.1
Nectria haematococca
e_gw1.3.1586.1
I
0.885
GLRG_03598
Colletotrichum graminicola
GLRG_03598
I
0.885
estExt_fgenesh1_pg.C_chr_50223
Mycosphaerella graminicola
estExt_fgenesh1_pg.C_chr_50223
I
0.885
FGSG_06979
Fusarium graminearum
FGSG_06979
I
0.880
FVEG_08209
Fusarium verticillioides
FVEG_08209
I
0.880
MGG_12912
Magnaporthe oryzae
MGG_12912
I
0.880
fgenesh1_pm.C_scaffold_2000184
Trichoderma virens
fgenesh1_pm.C_scaffold_2000184
I
0.874
CHGG_05815
Chaetomium globosum
CHGG_05815
I
0.874
SS1G_06958
Sclerotinia sclerotiorum
SS1G_06958
I
0.869
e_gw1.10.1104.1
Trichoderma atroviride
e_gw1.10.1104.1
I
0.869
estExt_GeneWisePlus.C_10737
Trichoderma reesei
estExt_GeneWisePlus.C_10737
I
0.869
estExt_Genewise1Plus.C_41937
Myceliophthora thermophila
estExt_Genewise1Plus.C_41937
I
0.864
Pa_7_9110
Podospora anserina
Pa_7_9110
I
0.864
VDAG_06495
Verticillium dahliae
VDAG_06495
I
0.864
BC1G_13428
Botrytis cinerea
BC1G_13428
I
0.864
estExt_Genewise1.C_10823
Cryphonectria parasitica
estExt_Genewise1.C_10823
I
0.859
NCU06251
Neurospora crassa
NCU06251
I
0.859
estExt_Genewise1.C_31967
Thielavia terrestris
estExt_Genewise1.C_31967
I
0.859
estExt_fgenesh3_kg.C_50353
Neurospora discreta
estExt_fgenesh3_kg.C_50353
I
0.853
estExt_fgenesh2_kg.C_60117
Neurospora tetrasperma
estExt_fgenesh2_kg.C_60117
I
0.853
GSTUMT00008354001
Tuber melanosporum
GSTUMT00008354001
I
0.838
estExt_fgenesh2_pm.C_10587
Agaricus bisporus
estExt_fgenesh2_pm.C_10587
I
0.785
estExt_Genewise1.C_440040
Phycomyces blakesleeanus
estExt_Genewise1.C_440040
I
0.780
CC1G_06779
Coprinopsis cinerea
CC1G_06779
I
0.780
estExt_fgenesh2_kg.C_10919
Serpula lacrymans
estExt_fgenesh2_kg.C_10919
I
0.780
e_gwh1.1.1236.1
Laccaria bicolor
e_gwh1.1.1236.1
I
0.780
estExt_fgeneshMC_pm.C_50126
Mucor circinelloides
estExt_fgeneshMC_pm.C_50126
I
0.775
estExt_Genewise1Plus.C_560144
Postia placenta
estExt_Genewise1Plus.C_560144
I
0.775
UM03654
Ustilago maydis
UM03654
I
0.770
estExt_fgenesh1_pm.C_11041
Schizophyllum commune
estExt_fgenesh1_pm.C_11041
I
0.764
FOXG_01834
Fusarium oxysporum
FOXG_01834
I
0.759
estExt_fgenesh1_kg.C_690018
Melampsora laricis populina
estExt_fgenesh1_kg.C_690018
I
0.754
gw1.2.1725.1
Mucor circinelloides
gw1.2.1725.1
I
0.754
fgenesh3_kg.3_#_30_#_1383_1_CCFG_CCFH
Pleurotus ostreatus
fgenesh3_kg.3_#_30_#_1383_1_CCFG_CCFH
I
0.749
fgenesh1_pg.C_scaffold_11000272
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_11000272
I
0.738
fgeneshTM_pg.13_#_145
Tremella mesenterica
fgeneshTM_pg.13_#_145
I
0.723
PGTG_14860
Puccinia graminis
PGTG_14860
N
0.707
CNBG_0752
Cryptococcus neoformans
CNBG_0752
N
0.702