CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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FOXG_01834
(
Fusarium oxysporum
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
FOXG_01834
T17651_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
ANIA_04546
M226_0.6
Aspergillus nidulans
ACCYMA
RNAcompete
Ray et al.(2013)
RNCMPT00265
0.764
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FOXG_01834T0
KH
18
80
TLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGCDAISRAYAIV
FOXG_01834T0
KH
104
167
PIKLLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIQRAIWEI
FOXG_01834T0
KH
261
299
TQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKLI
Links
Other
KH
family RBPs
Other
Fusarium oxysporum
RBPs
49 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
FVEG_08209
Fusarium verticillioides
FVEG_08209
I
0.859
FGSG_06979
Fusarium graminearum
FGSG_06979
I
0.859
e_gw1.3.1586.1
Nectria haematococca
e_gw1.3.1586.1
I
0.853
fgenesh1_pm.C_scaffold_2000184
Trichoderma virens
fgenesh1_pm.C_scaffold_2000184
I
0.843
e_gw1.10.1104.1
Trichoderma atroviride
e_gw1.10.1104.1
I
0.838
estExt_GeneWisePlus.C_10737
Trichoderma reesei
estExt_GeneWisePlus.C_10737
I
0.838
CHGG_05815
Chaetomium globosum
CHGG_05815
I
0.832
BC1G_13428
Botrytis cinerea
BC1G_13428
I
0.832
VDAG_06495
Verticillium dahliae
VDAG_06495
I
0.832
estExt_Genewise1.C_31967
Thielavia terrestris
estExt_Genewise1.C_31967
I
0.827
SS1G_06958
Sclerotinia sclerotiorum
SS1G_06958
I
0.817
MGG_12912
Magnaporthe oryzae
MGG_12912
I
0.817
GLRG_03598
Colletotrichum graminicola
GLRG_03598
I
0.812
estExt_Genewise1Plus.C_41937
Myceliophthora thermophila
estExt_Genewise1Plus.C_41937
I
0.812
estExt_Genewise1.C_10823
Cryphonectria parasitica
estExt_Genewise1.C_10823
I
0.812
Pa_7_9110
Podospora anserina
Pa_7_9110
I
0.806
estExt_fgenesh3_kg.C_50353
Neurospora discreta
estExt_fgenesh3_kg.C_50353
I
0.801
NCU06251
Neurospora crassa
NCU06251
I
0.801
estExt_fgenesh2_kg.C_60117
Neurospora tetrasperma
estExt_fgenesh2_kg.C_60117
I
0.796
PMAA_044720
Penicillium marneffei
PMAA_044720
I
0.780
Pc18g04820
Penicillium chrysogenum
Pc18g04820
I
0.764
ANIA_04546
Aspergillus nidulans
CADANIAG00005892
D
0.764
BDBG_04961
Blastomyces dermatitidis
BDBG_04961
I
0.759
PABG_02940
Paracoccidioides brasiliensis
PABG_02940
I
0.759
AFUA_2G02780
Aspergillus fumigatus
CADAFUAG00003337
I
0.759
AFLA_133290
Aspergillus flavus
CADAFLAG00007208
I
0.759
HCAG_06295
Histoplasma capsulatum
HCAG_06295
I
0.759
AO090026000625
Aspergillus oryzae
CADAORAG00008641
I
0.759
ATEG_09612
Aspergillus terreus
CADATEAG00005390
I
0.759
NFIA_035170
Neosartorya fischeri
CADNFIAG00003466
I
0.759
ACLA_092010
Aspergillus clavatus
CADACLAG00008508
I
0.759
MCYG_00862
Microsporum canis
MCYG_00862
I
0.754
fgenesh1_pg.00009_#_201
Aspergillus carbonarius
fgenesh1_pg.00009_#_201
I
0.754
MGYG_01105
Microsporum gypseum
MGYG_01105
I
0.754
ARB_05593
Arthroderma benhamiae
ARB_05593
I
0.754
TERG_00415
Trichophyton rubrum
TERG_00415
I
0.754
TRV_06814
Trichophyton verrucosum
TRV_06814
I
0.754
An07g07150
Aspergillus niger
CADANGAG00005988
I
0.754
TEQG_01493
Trichophyton equinum
TEQG_01493
I
0.754
TESG_02394
Trichophyton tonsurans
TESG_02394
I
0.754
SNOG_14668
Stagonospora nodorum
SNOG_14668
I
0.754
UREG_06886
Uncinocarpus reesii
UREG_06886
I
0.749
EAT77860.2
Phaeosphaeria nodorum
EAT77860.2
I
0.749
AB04126.1
Alternaria brassicicola
AB04126.1
I
0.743
estExt_fgenesh1_pg.C_chr_50223
Mycosphaerella graminicola
estExt_fgenesh1_pg.C_chr_50223
I
0.743
estExt_fgenesh1_pm.C_10552
Mycosphaerella fijiensis
estExt_fgenesh1_pm.C_10552
I
0.743
estExt_Genewise1Plus.C_11417
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_11417
I
0.743
CIMG_01955
Coccidioides immitis
CIMG_01955
I
0.738
PTRG_00277
Pyrenophora tritici repentis
PTRG_00277
I
0.738