CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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FMR1
(
Choloepus hoffmanni
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSCHOG00000006340
T18492_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCHOP00000005607
KH
10
69
HEQFIVREDLMGLAIGTHGANIQQARKVPGVTAIDLDEDTCTFHIYGEDQDAVKKARSFL
Links
Other
KH
family RBPs
Other
Choloepus hoffmanni
RBPs
12 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
FMR1
Tarsius syrichta
ENSTSYG00000014392
N
1.000
FMR1
Pan troglodytes
ENSPTRG00000022349
I
1.000
FMR1
Homo sapiens
ENSG00000102081
D
1.000
FMR1
Erinaceus europaeus
ENSEEUG00000015366
N
1.000
LOC100414871
Callithrix jacchus
ENSCJAG00000003925
I
1.000
FMR1
Myotis lucifugus
ENSMLUG00000000587
N
1.000
FMR1
Macropus eugenii
ENSMEUG00000014280
N
0.967
FXR1
Macropus eugenii
ENSMEUG00000004706
N
0.867
FXR1
Tupaia belangeri
ENSTBEG00000007370
N
0.850
FXR2
Otolemur garnettii
ENSOGAG00000008146
N
0.767
FXR2
Ornithorhynchus anatinus
ENSOANG00000005646
N
0.750
FXR1
Choloepus hoffmanni
ENSCHOG00000012877
N
0.700