CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
HDLBP
(
Erinaceus europaeus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSEEUG00000014648
T18737_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSEEUP00000013395
KH
2
62
SATVTIPKEHHRFVIGKNGEKLQDLELKTATKIQIPRPDDASSQIRITGTKEGIDKARHEV
ENSEEUP00000013395
KH
74
134
VERLDVEKAFHPFISGPYNRLVGEIMQDTGTRINIPPPSVNRTEIVLTGEKEQLAQAVARI
ENSEEUP00000013395
KH
147
201
TIAVEVKKSQHKYVIGPKGNSLQEILERTGVSVEIPPFRRRSQTMIFPVRPRSGQ
ENSEEUP00000013395
KH
244
273
XXVHIEFTEGEDKITLEGPTEDVSVAQEQI
ENSEEUP00000013395
KH
286
346
YVEINIDHKFHRHLIGKSGANINRIKDQYKVSVRIPPDSEKSSLIRIEGDPQGVQQAKREL
ENSEEUP00000013395
KH
358
419
TKDLLIEQRFHRTIIGQKGERVREIRDKFPEVIINFPDPAQKSDVVQLRGPKNEVEKCAKYM
ENSEEUP00000013395
KH
432
492
SISVPIFKQFHKNIIGKGGANIKKIREESNTKIDLPAENSNSETIVITGKRANCEAARSRI
ENSEEUP00000013395
KH
504
565
ELEVSIPAKLHNALIGTKGRLIRSIMEECGGVHIHFPVEGSGSDTVVIRGPLSDVEKAKKQL
ENSEEUP00000013395
KH
578
626
TVDIRAKPEYHKFLIGKGGGKIRKVRDSTGARIIFPTAEDKDQDLITXX
ENSEEUP00000013395
KH
653
712
XXXVDPRHHRHFVIRRGQVLREIAEEYGGVMVSFPRSGTQSDKVTLKGAKDCVEAAKKRI
ENSEEUP00000013395
KH
724
769
TIECAIPQKFHRSVMGPKGSRIQQITRDHNVQIKFPDREENPXXXX
ENSEEUP00000013395
KH
823
883
TIEVEVPFDLHRYIIGQKGSGIRKMMDAFEVNIHVPAPELQSEVIAITGLAANLDRAKAGL
ENSEEUP00000013395
KH
903
966
KLSVTVDPKYHPKIIGRKGTVITQIRLEHDVNIQFPDKEDGGQAQDQITITGYEKNTEAARDAI
ENSEEUP00000013395
KH
978
1039
SEDVPLDHRVHARIIGARGNAIRKIMDEFKVDIRFPQSGAPDPNCVTVTGLPENVEEAIDHI
Links
Other
KH
family RBPs
Other
Erinaceus europaeus
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
HDLBP
Homo sapiens
ENSG00000115677
N
0.777
HDLBP
Callithrix jacchus
ENSCJAG00000006152
N
0.776