CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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FUBP1
(
Macropus eugenii
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSMEUG00000007917
T18958_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMEUP00000007246
KH
172
211
XERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQAKEMV
ENSMEUP00000007246
KH
237
299
GLDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEII
ENSMEUP00000007246
KH
338
383
EFNFIVPTGKTGLIIGKGGETIKSISHQSGAGIELQRNPSXXXXXX
Links
Other
KH
family RBPs
Other
Macropus eugenii
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
FUBP1
Felis catus
ENSFCAG00000010330
N
0.711
FUBP1
Erinaceus europaeus
ENSEEUG00000001287
N
0.711
FUBP1
Cavia porcellus
ENSCPOG00000002757
I
0.711
FUBP1
Callithrix jacchus
ENSCJAG00000007062
I
0.711
FUBP1
Oryctolagus cuniculus
ENSOCUG00000002225
I
0.711