CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ANKRD17
(
Spermophilus tridecemlineatus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSSTOG00000009037
T19526_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
ANKHD1
M002_0.6
Homo sapiens
AGACGWW
RNAcompete
Ray et al.(2013)
RNCMPT00002
0.708
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSTOP00000008145
KH
1653
1717
SKKVSVPSTVISRVIGRGGCNINAIREFTGAHIDIDKQKDKTGDRIITIRQFGGTESTRQATQLI
Links
Other
KH
family RBPs
Other
Spermophilus tridecemlineatus
RBPs
71 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ANKRD17
Otolemur garnettii
ENSOGAG00000000297
N
0.955
ANKRD17
Choloepus hoffmanni
ENSCHOG00000013527
I
0.954
ANKRD17
Callithrix jacchus
ENSCJAG00000014029
I
0.954
ENSPPYG00000014821
Pongo pygmaeus
ENSPPYG00000014821
I
0.954
XR_012966.1
Macaca mulatta
ENSMMUG00000030283
I
0.954
ANKRD17
Loxodonta africana
ENSLAFG00000021478
I
0.954
ANKRD17
Bos taurus
ENSBTAG00000004912
I
0.954
ANKRD17
Ochotona princeps
ENSOPRG00000014184
I
0.954
ENSOCUG00000011629
Oryctolagus cuniculus
ENSOCUG00000011629
I
0.954
ANKRD17
Homo sapiens
ENSG00000132466
I
0.954
ANKRD17
Gorilla gorilla
ENSGGOG00000006916
I
0.954
Ankrd17
Dipodomys ordii
ENSDORG00000011159
I
0.954
ANKRD17
Pan troglodytes
ENSPTRG00000016149
I
0.954
ANKRD17
Cavia porcellus
ENSCPOG00000013416
I
0.954
ANKRD17
Canis familiaris
ENSCAFG00000002998
I
0.954
ANKRD17
Tarsius syrichta
ENSTSYG00000004652
I
0.954
ANKRD17
Vicugna pacos
ENSVPAG00000001331
I
0.954
ANKRD17
Tursiops truncatus
ENSTTRG00000016542
I
0.954
ANKRD17
Pteropus vampyrus
ENSPVAG00000001827
I
0.954
Ankrd17
Rattus norvegicus
ENSRNOG00000002940
I
0.954
ANKRD17
Monodelphis domestica
ENSMODG00000019154
I
0.954
ANKRD17
Macropus eugenii
ENSMEUG00000015289
I
0.954
ANKRD17
Anolis carolinensis
ENSACAG00000011145
I
0.954
ANKRD17
Taeniopygia guttata
ENSTGUG00000001580
I
0.938
Ankrd17
Mus musculus
ENSMUSG00000055204
I
0.938
ankrd17
Xenopus tropicalis
ENSXETG00000008132
I
0.938
ANKRD17
Meleagris gallopavo
ENSMGAG00000010121
I
0.938
ANKRD17
Erinaceus europaeus
ENSEEUG00000009974
N
0.928
ANKRD17
Echinops telfairi
ENSETEG00000010944
N
0.928
Ame_R019267
Ailuropoda melanoleuca
Ame_R019267
N
0.863
ANKRD17
Procavia capensis
ENSPCAG00000009242
N
0.731
ANKRD17
Dasypus novemcinctus
ENSDNOG00000014851
N
0.731
ENSOANG00000006904
Ornithorhynchus anatinus
ENSOANG00000006904
N
0.712
ENSMODG00000011596
Monodelphis domestica
ENSMODG00000011596
I
0.708
ENSMUSG00000089986
Mus musculus
ENSMUSG00000089986
I
0.708
Ankhd1
Mus musculus
ENSMUSG00000024483
I
0.708
ANKHD1
Oryzias latipes
ENSORLG00000006908
I
0.708
Ankhd1-Eif4ebp3
Rattus norvegicus
ENSRNOG00000030247
I
0.708
ENSSSCG00000014364
Sus scrofa
ENSSSCG00000014364
I
0.708
ENSSTOG00000001936
Spermophilus tridecemlineatus
ENSSTOG00000001936
I
0.708
ENSPVAG00000009697
Pteropus vampyrus
ENSPVAG00000009697
I
0.708
XR_019937.1
Pan troglodytes
ENSPTRG00000017313
I
0.708
ENSOGAG00000014263
Otolemur garnettii
ENSOGAG00000014263
I
0.708
ENSOPRG00000006675
Ochotona princeps
ENSOPRG00000006675
I
0.708
ENSPPYG00000015854
Pongo pygmaeus
ENSPPYG00000015854
I
0.708
ENSOCUG00000015943
Oryctolagus cuniculus
ENSOCUG00000015943
I
0.708
ENSG00000249536
Homo sapiens
ENSG00000249536
I
0.708
ENSACAG00000013168
Anolis carolinensis
ENSACAG00000013168
I
0.708
Ame_R000345
Ailuropoda melanoleuca
Ame_R000345
I
0.708
ENSBTAG00000010871
Bos taurus
ENSBTAG00000010871
I
0.708
ENSCAFG00000005786
Canis familiaris
ENSCAFG00000005786
I
0.708
ENSCHOG00000005963
Choloepus hoffmanni
ENSCHOG00000005963
I
0.708
ankhd1
Xenopus tropicalis
ENSXETG00000018337
I
0.708
ENSTTRG00000005573
Tursiops truncatus
ENSTTRG00000005573
I
0.708
ANKHD1
Taeniopygia guttata
ENSTGUG00000001656
I
0.708
ANKHD1
Tetraodon nigroviridis
ENSTNIG00000008996
I
0.708
ANKHD1
Takifugu rubripes
ENSTRUG00000001146
I
0.708
ENSTSYG00000003323
Tarsius syrichta
ENSTSYG00000003323
I
0.708
ANKHD1
Callithrix jacchus
ENSCJAG00000016624
I
0.708
ENSCPOG00000019435
Cavia porcellus
ENSCPOG00000019435
I
0.708
ENSGGOG00000000288
Gorilla gorilla
ENSGGOG00000000288
I
0.708
ENSLAFG00000005337
Loxodonta africana
ENSLAFG00000005337
I
0.708
ENSMICG00000000358
Microcebus murinus
ENSMICG00000000358
I
0.708
ENSMLUG00000003126
Myotis lucifugus
ENSMLUG00000003126
I
0.708
ANKHD1
Gasterosteus aculeatus
ENSGACG00000018351
I
0.708
ANKHD1
Homo sapiens
ENSG00000131503
D
0.708
ankhd1
Danio rerio
ENSDARG00000077860
I
0.708
LOC100072419
Equus caballus
ENSECAG00000015036
I
0.708
ENSETEG00000012639
Echinops telfairi
ENSETEG00000012639
I
0.708
ENSFCAG00000001275
Felis catus
ENSFCAG00000001275
I
0.708
ENSMMUG00000019583
Macaca mulatta
ENSMMUG00000019583
I
0.708