CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
ankrd17
(
Xenopus tropicalis
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSXETG00000008132
T19754_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
ANKHD1
M002_0.6
Homo sapiens
AGACGWW
RNAcompete
Ray et al.(2013)
RNCMPT00002
0.730
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSXETP00000017818
KH
1609
1671
SKKVSVPSTVISRVIGRGGCNINAIREFTGAHIDIDKQKDKTGDRIITIRGGTESTRQATHLI
ENSXETP00000017819
KH
131
193
SKKVSVPSTVISRVIGRGGCNINAIREFTGAHIDIDKQKDKTGDRIITIRGGTESTRQATHLI
ENSXETP00000017825
KH
137
199
SKKVSVPSTVISRVIGRGGCNINAIREFTGAHIDIDKQKDKTGDRIITIRGGTESTRQATHLI
Links
Other
KH
family RBPs
Other
Xenopus tropicalis
RBPs
75 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ankrd17
Dipodomys ordii
ENSDORG00000011159
I
0.984
ANKRD17
Monodelphis domestica
ENSMODG00000019154
I
0.984
ANKRD17
Cavia porcellus
ENSCPOG00000013416
I
0.984
ANKRD17
Loxodonta africana
ENSLAFG00000021478
I
0.984
ANKRD17
Ochotona princeps
ENSOPRG00000014184
I
0.984
ANKRD17
Gorilla gorilla
ENSGGOG00000006916
I
0.984
Ankrd17
Rattus norvegicus
ENSRNOG00000002940
I
0.984
XR_012966.1
Macaca mulatta
ENSMMUG00000030283
I
0.984
ANKRD17
Pteropus vampyrus
ENSPVAG00000001827
I
0.984
ANKRD17
Pan troglodytes
ENSPTRG00000016149
I
0.984
ANKRD17
Homo sapiens
ENSG00000132466
I
0.984
ANKRD17
Callithrix jacchus
ENSCJAG00000014029
I
0.984
ANKRD17
Anolis carolinensis
ENSACAG00000011145
I
0.984
ENSOCUG00000011629
Oryctolagus cuniculus
ENSOCUG00000011629
I
0.984
ENSPPYG00000014821
Pongo pygmaeus
ENSPPYG00000014821
I
0.984
ANKRD17
Tursiops truncatus
ENSTTRG00000016542
I
0.984
ANKRD17
Vicugna pacos
ENSVPAG00000001331
I
0.984
ANKRD17
Bos taurus
ENSBTAG00000004912
I
0.984
ANKRD17
Tarsius syrichta
ENSTSYG00000004652
I
0.984
ANKRD17
Choloepus hoffmanni
ENSCHOG00000013527
I
0.984
ANKRD17
Canis familiaris
ENSCAFG00000002998
I
0.984
ANKRD17
Macropus eugenii
ENSMEUG00000015289
I
0.984
Ankrd17
Mus musculus
ENSMUSG00000055204
I
0.968
ANKRD17
Meleagris gallopavo
ENSMGAG00000010121
I
0.968
ANKRD17
Taeniopygia guttata
ENSTGUG00000001580
I
0.968
ANKRD17
Spermophilus tridecemlineatus
ENSSTOG00000009037
I
0.938
ANKRD17
Otolemur garnettii
ENSOGAG00000000297
N
0.910
ANKRD17
Echinops telfairi
ENSETEG00000010944
N
0.899
ANKRD17
Erinaceus europaeus
ENSEEUG00000009974
N
0.884
Ame_R019267
Ailuropoda melanoleuca
Ame_R019267
N
0.822
ANKRD17
Procavia capensis
ENSPCAG00000009242
N
0.731
ANKRD17
Dasypus novemcinctus
ENSDNOG00000014851
N
0.731
ANKHD1
Oryzias latipes
ENSORLG00000006908
I
0.730
ENSOGAG00000014263
Otolemur garnettii
ENSOGAG00000014263
I
0.730
ENSOPRG00000006675
Ochotona princeps
ENSOPRG00000006675
I
0.730
ENSSSCG00000014364
Sus scrofa
ENSSSCG00000014364
I
0.730
ANKHD1
Tetraodon nigroviridis
ENSTNIG00000008996
I
0.730
ANKHD1
Takifugu rubripes
ENSTRUG00000001146
I
0.730
ENSTSYG00000003323
Tarsius syrichta
ENSTSYG00000003323
I
0.730
ENSTTRG00000005573
Tursiops truncatus
ENSTTRG00000005573
I
0.730
ANKHD1
Taeniopygia guttata
ENSTGUG00000001656
I
0.730
ENSSTOG00000001936
Spermophilus tridecemlineatus
ENSSTOG00000001936
I
0.730
XR_019937.1
Pan troglodytes
ENSPTRG00000017313
I
0.730
ENSPVAG00000009697
Pteropus vampyrus
ENSPVAG00000009697
I
0.730
Ankhd1-Eif4ebp3
Rattus norvegicus
ENSRNOG00000030247
I
0.730
ENSPPYG00000015854
Pongo pygmaeus
ENSPPYG00000015854
I
0.730
ENSMICG00000000358
Microcebus murinus
ENSMICG00000000358
I
0.730
ENSCPOG00000019435
Cavia porcellus
ENSCPOG00000019435
I
0.730
ANKHD1
Callithrix jacchus
ENSCJAG00000016624
I
0.730
ankhd1
Danio rerio
ENSDARG00000077860
I
0.730
LOC100072419
Equus caballus
ENSECAG00000015036
I
0.730
ENSETEG00000012639
Echinops telfairi
ENSETEG00000012639
I
0.730
ENSCHOG00000005963
Choloepus hoffmanni
ENSCHOG00000005963
I
0.730
ENSCAFG00000005786
Canis familiaris
ENSCAFG00000005786
I
0.730
ankhd1
Xenopus tropicalis
ENSXETG00000018337
I
0.730
Ame_R000345
Ailuropoda melanoleuca
Ame_R000345
I
0.730
ENSACAG00000013168
Anolis carolinensis
ENSACAG00000013168
I
0.730
ENSBTAG00000010871
Bos taurus
ENSBTAG00000010871
I
0.730
ENSOCUG00000015943
Oryctolagus cuniculus
ENSOCUG00000015943
I
0.730
ENSFCAG00000001275
Felis catus
ENSFCAG00000001275
I
0.730
ENSMMUG00000019583
Macaca mulatta
ENSMMUG00000019583
I
0.730
ENSMLUG00000003126
Myotis lucifugus
ENSMLUG00000003126
I
0.730
ENSMODG00000011596
Monodelphis domestica
ENSMODG00000011596
I
0.730
Ankhd1
Mus musculus
ENSMUSG00000024483
I
0.730
ENSMUSG00000089986
Mus musculus
ENSMUSG00000089986
I
0.730
ENSLAFG00000005337
Loxodonta africana
ENSLAFG00000005337
I
0.730
ENSGGOG00000000288
Gorilla gorilla
ENSGGOG00000000288
I
0.730
ENSG00000249536
Homo sapiens
ENSG00000249536
I
0.730
ANKHD1
Gasterosteus aculeatus
ENSGACG00000018351
I
0.730
ANKHD1
Homo sapiens
ENSG00000131503
D
0.730
ENSSARG00000007287
Sorex araneus
ENSSARG00000007287
I
0.714
ENSDNOG00000014116
Dasypus novemcinctus
ENSDNOG00000014116
I
0.714
SLC4A9
Meleagris gallopavo
ENSMGAG00000001068
I
0.714
ANKHD1-EIF4EBP3
Gallus gallus
ENSGALG00000001099
I
0.714