CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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FUBP1
(
Tupaia belangeri
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSTBEG00000017333
T19563_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTBEP00000015082
KH
62
121
TEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVXXXX
ENSTBEP00000015082
KH
240
299
XPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEII
ENSTBEP00000015082
KH
338
403
EFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLI
Links
Other
KH
family RBPs
Other
Tupaia belangeri
RBPs
7 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
FUBP1
Sorex araneus
ENSSARG00000011730
N
0.747
FUBP1
Oryctolagus cuniculus
ENSOCUG00000002225
I
0.732
FUBP1
Felis catus
ENSFCAG00000010330
N
0.732
FUBP1
Erinaceus europaeus
ENSEEUG00000001287
N
0.732
FUBP1
Cavia porcellus
ENSCPOG00000002757
I
0.732
FUBP1
Callithrix jacchus
ENSCJAG00000007062
I
0.732
FUBP3
Echinops telfairi
ENSETEG00000008842
N
0.718