CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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bicc1
(
Xenopus tropicalis
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSXETG00000005117
T19751_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSXETP00000011134
KH
1
44
QIMEETNTQIAWPSKLKIGAKSKKDPHIKVSGKKENVKEAKERI
ENSXETP00000011134
KH
56
121
TLKMDVSHTEHSHVIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRI
ENSXETP00000011134
KH
147
191
NSPTIQQISQTYNITVSFKQRSRVYGATVIVRGSQNNTSAVKEGT
ENSXETP00000011134
KH
209
271
STQLDIAAQHHLFMMGRNGCNIKHIMQRTGAQIHFPDPNNPLKKSTVYLQGTIESVCLARQYL
Links
Other
KH
family RBPs
Other
Xenopus tropicalis
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
BICC1
Homo sapiens
ENSG00000122870
N
0.940
e_gw1.376.28.1
Capitella teleta
e_gw1.376.28.1
N
0.723