CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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e_gw1.376.28.1
(
Capitella teleta
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
e_gw1.376.28.1
T20774_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.376.28.1
KH
14
57
QVMEETNTEISWPAKLKIGAKSKKDPHIKVSGQQEAVSAAKDRI
e_gw1.376.28.1
KH
69
134
TLKLDVPHTEHSHVIGKGGNNIKRVMQDTGCHIHFPDSNRNNQAEKSNQVSIAGQPSGVEEARSKI
e_gw1.376.28.1
KH
160
203
SPTMQHIQNTYNVSVTFKQRPRSYATTVIIRGSVSNAKEVKEAT
e_gw1.376.28.1
KH
221
285
SMQLEIAPQHHLFIIGRGGANMKQIMQRTGAQIHFPDLNSSTPQRRGTVFITGAIESVFLARQHL
Links
Other
KH
family RBPs
Other
Capitella teleta
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
bicc1
Xenopus tropicalis
ENSXETG00000005117
N
0.723
BICC1
Homo sapiens
ENSG00000122870
N
0.717