CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
GD16260
(
Drosophila simulans
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
FBgn0187887
T19968_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0214662
KH
297
359
TYEFLFPISLIGHLYGRKRAFINQIKAKTLASVSLGKNPYSGKVRICTIEGTESEIDAALAMI
Links
Other
KH
family RBPs
Other
Drosophila simulans
RBPs
11 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
yu
Drosophila melanogaster
FBgn0029764
N
0.984
GM12645
Drosophila sechellia
FBgn0167581
N
0.952
GE16815
Drosophila yakuba
FBgn0234307
N
0.952
GG18497
Drosophila erecta
FBgn0110710
N
0.952
GK25472
Drosophila willistoni
FBgn0227431
N
0.937
GF20944
Drosophila ananassae
FBgn0097949
N
0.841
GJ14809
Drosophila virilis
FBgn0202013
N
0.797
GI11050
Drosophila mojavensis
FBgn0133813
N
0.781
GH24358
Drosophila grimshawi
FBgn0131814
N
0.766
GA28855-RA
Drosophila pseudoobscura
FBgn0250214
N
0.754
GL14640
Drosophila persimilis
FBgn0152244
N
0.754