XM_002892746.1 (Arabidopsis lyrata)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 fgenesh2_kg.1__1532__AT1G14170.3 T20065_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.1__1532__AT1G14170.3 KH 45 103
fgenesh2_kg.1__1532__AT1G14170.3 KH 146 214
fgenesh2_kg.1__1532__AT1G14170.3 KH 269 323
fgenesh2_kg.1__1532__AT1G14170.3 KH 353 420

Links

Other KH family RBPs
Other Arabidopsis lyrata RBPs

3 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AT1G14170 Arabidopsis thaliana AT1G14170-TAIR-G N 0.972
XM_002875141.1 Arabidopsis lyrata Al_scaffold_0005_243 N 0.816
GSVIVG00019958001 Vitis vinifera GSVIVG00019958001 N 0.718