B9N6B7_POPTR (Populus trichocarpa)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 POPTR_0006s29200 T20206_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0006s29200.1 KH 54 110
POPTR_0006s29200.1 KH 150 217
POPTR_0006s29200.1 KH 330 392

Links

Other KH family RBPs
Other Populus trichocarpa RBPs

11 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
cassava18339.valid.m1 Manihot esculenta cassava18339.valid.m1 N 0.853
28226.m000850 Ricinus communis 28226.m000850 N 0.832
chr4.CM0244.150.nd Lotus japonicus chr4.CM0244.150.nd N 0.753
ppa004405m Prunus persica ppa004405m N 0.749
Cucsa.089000 Cucumis sativus Cucsa.089000 N 0.747
Glyma17g06640.1 Glycine max Glyma17g06640.1 N 0.747
Glyma13g00510.1 Glycine max Glyma13g00510.1 N 0.743
Glyma09g06750.1 Glycine max Glyma09g06750.1 N 0.743
30198.m000862 Ricinus communis 30198.m000862 N 0.728
Medtr8g129730 Medicago truncatula Medtr8g129730 N 0.717
mgf013216m Mimulus guttatus mgf013216m N 0.717