estExt_fgenesh2_pg.C_1480047 (Branchiostoma floridae)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 estExt_fgenesh2_pg.C_1480047 T20879_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_pg.C_1480047 KH 112 174
estExt_fgenesh2_pg.C_1480047 KH 200 264
estExt_fgenesh2_pg.C_1480047 KH 310 372
estExt_fgenesh2_pg.C_1480047 KH 412 477

Links

Other KH family RBPs
Other Branchiostoma floridae RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH60400 Xenopus laevis AAH60400 N 0.702
FUBP1 Procavia capensis ENSPCAG00000012617 I 0.700
FUBP1 Otolemur garnettii ENSOGAG00000014233 I 0.700
FUBP1 Ornithorhynchus anatinus ENSOANG00000009777 I 0.700
ENSPPYG00000001219 Pongo pygmaeus ENSPPYG00000001219 I 0.700
FUBP1 Pan troglodytes ENSPTRG00000000888 I 0.700
FUBP1 Vicugna pacos ENSVPAG00000004709 I 0.700
FUBP1 Tursiops truncatus ENSTTRG00000000096 I 0.700
ENSSSCG00000003771 Sus scrofa ENSSSCG00000003771 I 0.700
ENSSSCG00000003767 Sus scrofa ENSSSCG00000003767 I 0.700
FUBP1 Macaca mulatta ENSMMUG00000002899 I 0.700
FUBP1 Loxodonta africana ENSLAFG00000003273 I 0.700
FUBP1 Callithrix jacchus ENSCJAG00000007062 I 0.700
FUBP1 Choloepus hoffmanni ENSCHOG00000008177 I 0.700
FUBP1 Canis familiaris ENSCAFG00000020361 I 0.700
Q08DJ3_BOVIN Bos taurus ENSBTAG00000008926 I 0.700
FUBP1 Cavia porcellus ENSCPOG00000002757 I 0.700
Fubp1 Dipodomys ordii ENSDORG00000016534 I 0.700
FUBP1 Gorilla gorilla ENSGGOG00000027554 I 0.700
FUBP1 Homo sapiens ENSG00000162613 I 0.700
FUBP1 Equus caballus ENSECAG00000010867 I 0.700
FUBP1 Myotis lucifugus ENSMLUG00000014802 I 0.700