CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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1700010141
(
Ostreococcus tauri
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
1700010141
T21530_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
1700010141
KH
48
111
VRIDGNAGRVIGKGGETVRYIETVCEVRVEFRRDEGVAVVTPRADFGGTREEKLANTRRAKALI
1700010141
KH
155
213
ELEFQIPCPGKEGRVIGRGAATIREISARSGASCHVVRGSGVCVAKGKRKCVRVAYQMV
1700010141
KH
302
362
TTIEVPCAGSEGRIVGKGGEMIKHLRAVTGCMVDIKNNKSPSAVVVISGTPYNAELCRSYV
Links
Other
KH
family RBPs
Other
Ostreococcus tauri
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
eugene.1600010143
Ostreococcus lucimarinus
eugene.1600010143
N
0.774
e_gw1.16.184.1
Ostreococcus RCC809
e_gw1.16.184.1
N
0.703