MDP0000135143 (Malus x domestica)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 MDP0000135143 T21808_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000135143 KH 87 152
MDP0000135143 KH 189 256
MDP0000135143 KH 390 452

Links

Other KH family RBPs
Other Malus x domestica RBPs

15 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ppa004405m Prunus persica ppa004405m N 0.878
Cucsa.089000 Cucumis sativus Cucsa.089000 N 0.812
Glyma13g00510.1 Glycine max Glyma13g00510.1 N 0.792
Glyma17g06640.1 Glycine max Glyma17g06640.1 N 0.777
chr4.CM0244.150.nd Lotus japonicus chr4.CM0244.150.nd N 0.766
Glyma09g06750.1 Glycine max Glyma09g06750.1 N 0.761
mgf013216m Mimulus guttatus mgf013216m N 0.742
Medtr8g129730 Medicago truncatula Medtr8g129730 N 0.741
cassava18339.valid.m1 Manihot esculenta cassava18339.valid.m1 N 0.736
30198.m000862 Ricinus communis 30198.m000862 N 0.731
28226.m000850 Ricinus communis 28226.m000850 N 0.721
GSVIVG00029319001 Vitis vinifera GSVIVG00029319001 N 0.716
Medtr2g042750 Medicago truncatula Medtr2g042750 N 0.711
XM_002869589.1 Arabidopsis lyrata fgenesh2_kg.7__1649__AT4G26000.1 N 0.706
PEP Arabidopsis thaliana AT4G26000-TAIR-G N 0.701