CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PNPT1
(
Gorilla gorilla
)
KH,S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
PF00575 (S1)
IPR018111
IPR003029
ENSGGOG00000006867
T22367_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000006726
KH
611
668
VETVQVPLSKRAKFVGPGGYNLKKLQAETGVTISQVDEETFSVFAPTPSAMHEARDFI
ENSGGOP00000006726
S1
679
755
QLEFGAVYTATITEISSIQVLIRLFFPMTFVLIHKHTSAKHSIIKHPTALGLEVGQEIQVKYFGRDPADGRMRLSRK
Links
Other
KH,S1
family RBPs
Other
Gorilla gorilla
RBPs
32 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PNPT1
Homo sapiens
ENSG00000138035
N
0.844
PNPT1
Pan troglodytes
ENSPTRG00000011934
N
0.844
Ame_R001792
Ailuropoda melanoleuca
Ame_R001792
N
0.837
PNPT1
Callithrix jacchus
ENSCJAG00000009740
N
0.837
PNPT1
Canis familiaris
ENSCAFG00000002891
N
0.830
PNPT1
Vicugna pacos
ENSVPAG00000007097
N
0.830
ENSPPYG00000012399
Pongo pygmaeus
ENSPPYG00000012399
N
0.830
LOC100052355
Equus caballus
ENSECAG00000020058
N
0.830
PNPT1
Sus scrofa
ENSSSCG00000008399
N
0.822
PNPT1
Bos taurus
ENSBTAG00000008909
N
0.822
PNPT1
Tursiops truncatus
ENSTTRG00000000029
N
0.822
PNPT1
Procavia capensis
ENSPCAG00000010806
N
0.822
Pnpt1
Mus musculus
ENSMUSG00000020464
N
0.815
PNPT1
Felis catus
ENSFCAG00000013236
N
0.815
PNPT1
Ochotona princeps
ENSOPRG00000010232
N
0.815
PNPT1
Myotis lucifugus
ENSMLUG00000003886
N
0.807
PNPT1
Oryctolagus cuniculus
ENSOCUG00000006889
N
0.807
Pnpt1
Rattus norvegicus
ENSRNOG00000003600
N
0.807
PNPT1
Choloepus hoffmanni
ENSCHOG00000007360
N
0.807
PNPT1
Cavia porcellus
ENSCPOG00000011008
N
0.800
PNPT1
Spermophilus tridecemlineatus
ENSSTOG00000006304
N
0.800
PNPT1
Monodelphis domestica
ENSMODG00000001984
N
0.785
PNPT1
Anolis carolinensis
ENSACAG00000003692
N
0.778
ENSOANG00000011178
Ornithorhynchus anatinus
ENSOANG00000011178
N
0.775
pnpt1
Xenopus tropicalis
ENSXETG00000006075
N
0.770
PNPT1
Oryzias latipes
ENSORLG00000004335
N
0.756
PNPT1
Meleagris gallopavo
ENSMGAG00000001952
N
0.741
PNPT1
Tetraodon nigroviridis
ENSTNIG00000007460
N
0.733
PNPT1
Gallus gallus
ENSGALG00000007935
N
0.726
PNPT1
Taeniopygia guttata
ENSTGUG00000006908
N
0.726
PNPT1
Gasterosteus aculeatus
ENSGACG00000010840
N
0.711
PNPT1
Echinops telfairi
ENSETEG00000001582
N
0.704