CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
amel4_ncbi_hmm3629
(
Apis mellifera
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
amel4_ncbi_hmm3629
T22642_0.6
DroSpeGe (2008-Jul-18)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
amel4_ncbi_hmm3629
La
26
83
LRNQIEYYFSEENLLRDFFLRRKMDAQGFLPITLIASFHRVQTLTTDVGLVIEAIMES
Links
Other
La
family RBPs
Other
Apis mellifera
RBPs
14 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
nasonia_NCBI_hmm577234
Nasonia vitripennis
nasonia_NCBI_hmm577234
N
0.833
PASA_GEN_26200017
Daphnia pulex
PASA_GEN_26200017
N
0.741
LARP1
Anolis carolinensis
ENSACAG00000004071
N
0.733
AGAP005291
Anopheles gambiae
AGAP005291
N
0.724
LARP1
Ornithorhynchus anatinus
ENSOANG00000005096
N
0.717
AAEL009073
Aedes aegypti
AAEL009073
N
0.707
LARP1
Oryzias latipes
ENSORLG00000000824
N
0.700
LARP1
Taeniopygia guttata
ENSTGUG00000000704
N
0.700
LARP1B
Monodelphis domestica
ENSMODG00000012300
N
0.700
LARP1
Macropus eugenii
ENSMEUG00000002957
N
0.700
LARP1B
Anolis carolinensis
ENSACAG00000011338
N
0.700
LARP1
Gallus gallus
ENSGALG00000004001
N
0.700
LARP1
Meleagris gallopavo
ENSMGAG00000005696
N
0.700
LARP1
Monodelphis domestica
ENSMODG00000008663
N
0.700