CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSCSAVG00000004942
(
Ciona savignyi
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
ENSCSAVG00000004942
T22714_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCSAVP00000008310
La
7
64
LKCQLEYYFSRENLAQDPYLVSQMDNQQFVSIWTVANFNAVKKLTNDISLVIQALKAS
Links
Other
La
family RBPs
Other
Ciona savignyi
RBPs
7 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSCING00000008328
Ciona intestinalis
ENSCING00000008328
N
0.845
ENSCING00000015692
Ciona intestinalis
ENSCING00000015692
N
0.845
nasonia_NCBI_hmm376894
Nasonia vitripennis
nasonia_NCBI_hmm376894
N
0.707
DGIL_AUG5s5549g4t1
Acyrtosiphon pisum
DGIL_AUG5s5549g4t1
N
0.707
e_gw1.29.70.1
Daphnia pulex
e_gw1.29.70.1
N
0.707
amel4_ncbi_hmm25495
Apis mellifera
amel4_ncbi_hmm25495
N
0.707
PHUM582400
Pediculus humanus
PHUM582400
N
0.707