CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
DGIL_AUG5s5549g4t1
(
Acyrtosiphon pisum
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
DGIL_AUG5s5549g4t1
T22644_0.6
DroSpeGe (2008-Jul-18)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
DGIL_AUG5s5549g4t1
La
95
152
LSNQLEYYFSRENLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRES
Links
Other
La
family RBPs
Other
Acyrtosiphon pisum
RBPs
24 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
nasonia_NCBI_hmm376894
Nasonia vitripennis
nasonia_NCBI_hmm376894
N
0.966
amel4_ncbi_hmm25495
Apis mellifera
amel4_ncbi_hmm25495
N
0.966
PHUM582400
Pediculus humanus
PHUM582400
N
0.948
AGAP006460
Anopheles gambiae
AGAP006460
N
0.897
GK17513
Drosophila willistoni
FBgn0219512
N
0.897
e_gw1.29.70.1
Daphnia pulex
e_gw1.29.70.1
N
0.879
AAEL010841
Aedes aegypti
AAEL010841
N
0.879
GF10124
Drosophila ananassae
FBgn0087165
N
0.862
GA11040-RA
Drosophila pseudoobscura
FBgn0071096
N
0.862
CG11505
Drosophila melanogaster
FBgn0035424
N
0.828
GE21342
Drosophila yakuba
FBgn0238604
N
0.828
GM14551
Drosophila sechellia
FBgn0169472
N
0.828
GI12555
Drosophila mojavensis
FBgn0135312
N
0.828
GG15116
Drosophila erecta
FBgn0107369
N
0.828
GJ15458
Drosophila virilis
FBgn0202651
N
0.793
GH15776
Drosophila grimshawi
FBgn0123247
N
0.776
XP_798222.2
Strongylocentrotus purpuratus
XP_798222.2
N
0.759
XP_001184765.1
Strongylocentrotus purpuratus
XP_001184765.1
N
0.759
fgenesh2_pg.scaffold_154000069
Branchiostoma floridae
fgenesh2_pg.scaffold_154000069
N
0.759
XP_001178699.1
Strongylocentrotus purpuratus
XP_001178699.1
N
0.741
XP_001200300.1
Strongylocentrotus purpuratus
XP_001200300.1
N
0.741
fgeneshTA2_pg.C_scaffold_3000241
Trichoplax adhaerens
fgeneshTA2_pg.C_scaffold_3000241
N
0.724
ENSCSAVG00000004942
Ciona savignyi
ENSCSAVG00000004942
N
0.707
XP_002156458.1
Hydra magnipapillata
XP_002156458.1
N
0.707