CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
GD13743
(
Drosophila simulans
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
FBgn0185448
T22917_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0212145
La
272
319
MENLANDTYLLSQMDSDQYVPIYTVARFNLVRKLTNDINLITEVLRES
Links
Other
La
family RBPs
Other
Drosophila simulans
RBPs
7 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GM14551
Drosophila sechellia
FBgn0169472
N
0.810
CG11505
Drosophila melanogaster
FBgn0035424
N
0.810
GE21342
Drosophila yakuba
FBgn0238604
N
0.810
GG15116
Drosophila erecta
FBgn0107369
N
0.810
GA11040-RA
Drosophila pseudoobscura
FBgn0071096
N
0.724
GK17513
Drosophila willistoni
FBgn0219512
N
0.707
GI12555
Drosophila mojavensis
FBgn0135312
N
0.707