CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
GM14551
(
Drosophila sechellia
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
FBgn0169472
T22912_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0196028
La
273
330
LATQLEYYFSRENLANDTYLLSQMDSDQYVPIYTVARFNLVRKLTNDINLITEVLRES
Links
Other
La
family RBPs
Other
Drosophila sechellia
RBPs
22 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CG11505
Drosophila melanogaster
FBgn0035424
N
1.000
GE21342
Drosophila yakuba
FBgn0238604
N
1.000
GG15116
Drosophila erecta
FBgn0107369
N
1.000
GA11040-RA
Drosophila pseudoobscura
FBgn0071096
N
0.914
GK17513
Drosophila willistoni
FBgn0219512
N
0.897
GI12555
Drosophila mojavensis
FBgn0135312
N
0.879
GF10124
Drosophila ananassae
FBgn0087165
N
0.879
GJ15458
Drosophila virilis
FBgn0202651
N
0.845
amel4_ncbi_hmm25495
Apis mellifera
amel4_ncbi_hmm25495
N
0.845
AAEL010841
Aedes aegypti
AAEL010841
N
0.828
nasonia_NCBI_hmm376894
Nasonia vitripennis
nasonia_NCBI_hmm376894
N
0.828
DGIL_AUG5s5549g4t1
Acyrtosiphon pisum
DGIL_AUG5s5549g4t1
N
0.828
GH15776
Drosophila grimshawi
FBgn0123247
N
0.828
AGAP006460
Anopheles gambiae
AGAP006460
N
0.810
GD13743
Drosophila simulans
FBgn0185448
N
0.810
PHUM582400
Pediculus humanus
PHUM582400
N
0.810
e_gw1.29.70.1
Daphnia pulex
e_gw1.29.70.1
N
0.793
XP_798222.2
Strongylocentrotus purpuratus
XP_798222.2
N
0.741
XP_001184765.1
Strongylocentrotus purpuratus
XP_001184765.1
N
0.741
fgenesh2_pg.scaffold_154000069
Branchiostoma floridae
fgenesh2_pg.scaffold_154000069
N
0.724
XP_001178699.1
Strongylocentrotus purpuratus
XP_001178699.1
N
0.724
XP_001200300.1
Strongylocentrotus purpuratus
XP_001200300.1
N
0.724