CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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fgenesh3_pg.136__29
(
Postia placenta
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
fgenesh3_pg.136__29
T23060_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh3_pg.136__29
La
980
1037
LLGQLEYYLSPQNMAMDFFLRQKMDSAGWIEISLLSSFNRVKRLTEDWQLVKDVLTLS
Links
Other
La
family RBPs
Other
Postia placenta
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
estExt_fgenesh2_pg.C_90178
Agaricus bisporus
estExt_fgenesh2_pg.C_90178
N
0.776
CC1G_15706
Coprinopsis cinerea
CC1G_15706
N
0.724
EuGene10000246
Heterobasidion annosum
EuGene10000246
N
0.724
fgenesh1_pg.C_scaffold_5000405
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_5000405
N
0.707