CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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XP_002156458.1
(
Hydra magnipapillata
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
XP_002156458.1
T23209_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_002156458.1
La
174
231
IQLQFEYYFSRENLANDAYLVSQMDSDSYVYISTVAKFNQIRKLTSDMKLIIEALKES
Links
Other
La
family RBPs
Other
Hydra magnipapillata
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
e_gw1.29.70.1
Daphnia pulex
e_gw1.29.70.1
N
0.759
PHUM582400
Pediculus humanus
PHUM582400
N
0.707
nasonia_NCBI_hmm376894
Nasonia vitripennis
nasonia_NCBI_hmm376894
N
0.707
DGIL_AUG5s5549g4t1
Acyrtosiphon pisum
DGIL_AUG5s5549g4t1
N
0.707