CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
PITG_17272
(
Phytophthora infestans
)
PUF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00806 (PUF)
IPR001313
PITG_17272
T23881_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PITG_17272T0
PUF
59
91
KMAGYVSHLWTNRYSSHVLQNLFSRASVVVSKE
PITG_17272T0
PUF
123
154
EVENEWITLMNDVSASHVLRSVLAVLAGKPLV
PITG_17272T0
PUF
286
317
VRGKMLQLAEHNIANYVVQHVIKLVRTETLAL
Links
Other
PUF
family RBPs
Other
Phytophthora infestans
RBPs
1 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
s_447013
Phytophthora sojae
s_447013
N
0.897