CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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s_447013
(
Phytophthora sojae
)
PUF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00806 (PUF)
IPR001313
s_447013
T24935_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
s_447013
PUF
95
127
KMAGYVSHLWTNRYSSHVLQHLLSLASVVVAKE
s_447013
PUF
163
194
EVEGEWITLMNDVSASHVLRSVLAVLAGKPLV
s_447013
PUF
326
355
VRGKMLQLVEHNIANYVVQHAIKLVRTEAL
Links
Other
PUF
family RBPs
Other
Phytophthora sojae
RBPs
1 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PITG_17272
Phytophthora infestans
PITG_17272
N
0.897