SS1G_00079 (Sclerotinia sclerotiorum)
PUF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF) IPR001313 SS1G_00079 T23938_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SS1T_00079 PUF 559 593
SS1T_00079 PUF 595 627
SS1T_00079 PUF 631 665
SS1T_00079 PUF 667 701
SS1T_00079 PUF 703 737
SS1T_00079 PUF 744 773
SS1T_00079 PUF 775 809
SS1T_00079 PUF 823 845

Links

Other PUF family RBPs
Other Sclerotinia sclerotiorum RBPs

12 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BC1G_11734 Botrytis cinerea BC1G_11734 N 0.985
GSTUMT00006192001 Tuber melanosporum GSTUMT00006192001 N 0.748
VDBG_06846 Verticillium albo atrum VDBG_06846 N 0.743
VDAG_05909 Verticillium dahliae VDAG_05909 N 0.739
ACLA_096290 Aspergillus clavatus CADACLAG00009295 N 0.717
GLRG_00003 Colletotrichum graminicola GLRG_00003 N 0.715
AFUA_6G04310 Aspergillus fumigatus CADAFUAG00000626 N 0.712
NFIA_050840 Neosartorya fischeri CADNFIAG00005172 N 0.712
AO090701000120 Aspergillus oryzae CADAORAG00010483 N 0.711
AFLA_055760 Aspergillus flavus CADAFLAG00006185 N 0.711
Pc20g12340 Penicillium chrysogenum Pc20g12340 N 0.710
fgenesh1_pg.00735_#_62 Aspergillus carbonarius fgenesh1_pg.00735_#_62 N 0.704