GLRG_00003 (Colletotrichum graminicola)
PUF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF) IPR001313 GLRG_00003 T23828_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GLRG_00003T0 PUF 432 466
GLRG_00003T0 PUF 468 500
GLRG_00003T0 PUF 504 539
GLRG_00003T0 PUF 540 573
GLRG_00003T0 PUF 576 610
GLRG_00003T0 PUF 612 646
GLRG_00003T0 PUF 648 681
GLRG_00003T0 PUF 693 722

Links

Other PUF family RBPs
Other Colletotrichum graminicola RBPs

8 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
VDAG_05909 Verticillium dahliae VDAG_05909 N 0.882
VDBG_06846 Verticillium albo atrum VDBG_06846 N 0.875
MGG_04985 Magnaporthe oryzae MGG_04985 N 0.745
estExt_Genewise1Plus.C_12215 Trichoderma atroviride estExt_Genewise1Plus.C_12215 N 0.737
e_gw1.9.204.1 Trichoderma reesei e_gw1.9.204.1 N 0.734
e_gw1.7.729.1 Trichoderma virens e_gw1.7.729.1 N 0.733
BC1G_11734 Botrytis cinerea BC1G_11734 N 0.715
SS1G_00079 Sclerotinia sclerotiorum SS1G_00079 N 0.715