estExt_Genewise1Plus.C_12215 (Trichoderma atroviride)
PUF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF) IPR001313 estExt_Genewise1Plus.C_12215 T24814_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_12215 PUF 24 58
estExt_Genewise1Plus.C_12215 PUF 60 93
estExt_Genewise1Plus.C_12215 PUF 96 131
estExt_Genewise1Plus.C_12215 PUF 132 166
estExt_Genewise1Plus.C_12215 PUF 168 202
estExt_Genewise1Plus.C_12215 PUF 206 238
estExt_Genewise1Plus.C_12215 PUF 243 274
estExt_Genewise1Plus.C_12215 PUF 286 314

Links

Other PUF family RBPs
Other Trichoderma atroviride RBPs

5 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gw1.7.729.1 Trichoderma virens e_gw1.7.729.1 N 0.971
e_gw1.9.204.1 Trichoderma reesei e_gw1.9.204.1 N 0.926
VDAG_05909 Verticillium dahliae VDAG_05909 N 0.740
GLRG_00003 Colletotrichum graminicola GLRG_00003 N 0.737
VDBG_06846 Verticillium albo atrum VDBG_06846 N 0.733