CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
PITG_02067
(
Phytophthora infestans
)
RanBP ZF,RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
PF00076 (RRM_1)
IPR001876
IPR000504
PITG_02067
T25443_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PITG_02067T0
RanBP ZF
31
58
EKNWICADCSHENYARRQRCFRCRAPKV
PITG_02067T0
RRM
267
338
LYVGGLKTASGHEAVKEQEEALWKQFGEWGEVENINVIHRKSICFVRYRHRTSAEFAKEAMANQSLQSDEVL
Links
Other
RanBP ZF,RRM
family RBPs
Other
Phytophthora infestans
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PITG_00088
Phytophthora infestans
PITG_00088
N
0.990
s_452871
Phytophthora sojae
s_452871
N
0.920