CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AGAP001645
(
Anopheles gambiae
)
RanBP ZF,RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
PF00076 (RRM_1)
IPR001876
IPR000504
AGAP001645
T25473_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AGAP001645-PA
RRM
131
209
IFIQGMTPETTEEEIAERFGSIGVIKRDKRTQKPKIWMYKDKETGNMKGEATVTYDDASAAQSAIGWFDNKEFNGAIVK
AGAP001645-PA
RanBP ZF
300
329
REGDWNCGECNNKNFAWRNECNRCKAPKGD
Links
Other
RanBP ZF,RRM
family RBPs
Other
Anopheles gambiae
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GI11213
Drosophila mojavensis
FBgn0133974
N
0.716
GK25719
Drosophila willistoni
FBgn0227678
N
0.706
GM13418
Drosophila sechellia
FBgn0168349
N
0.706
caz
Drosophila melanogaster
FBgn0011571
N
0.706