CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSCAFG00000007811
(
Canis familiaris
)
RanBP ZF,RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
PF00076 (RRM_1)
IPR001876
IPR000504
ENSCAFG00000007811
T25515_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCAFP00000017991
RRM
294
372
IYVQGLNDTVTLDNPAVFFKQCGVVKMSKRTGQPMIHIYLDKETGKPKSGATVSYEDPPTAKAAVELFDGKDFQGSKLK
ENSCAFP00000017991
RanBP ZF
432
463
QAKDWQCPNPGCGNQNFAWRTECNQCKALKPE
Links
Other
RanBP ZF,RRM
family RBPs
Other
Canis familiaris
RBPs
41 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
EWSR1
Gorilla gorilla
ENSGGOG00000012212
N
0.901
LOC607046
Canis familiaris
ENSCAFG00000012160
N
0.901
EWSR1
Pan troglodytes
ENSPTRG00000014218
N
0.901
ENSPPYG00000011684
Pongo pygmaeus
ENSPPYG00000011684
N
0.901
Ewsr1
Mus musculus
ENSMUSG00000009079
N
0.901
EWSR1
Macaca mulatta
ENSMMUG00000021374
N
0.901
EWSR1
Pteropus vampyrus
ENSPVAG00000009815
N
0.901
EWSR1
Homo sapiens
ENSG00000182944
N
0.901
ENSCJAG00000019987
Callithrix jacchus
ENSCJAG00000019987
N
0.901
EWSR1
Sus scrofa
ENSSSCG00000009974
N
0.901
EWSR1
Erinaceus europaeus
ENSEEUG00000012884
N
0.901
Ewsr1
Rattus norvegicus
ENSRNOG00000009437
N
0.892
EWSR1
Procavia capensis
ENSPCAG00000010966
N
0.892
EWSR1
Loxodonta africana
ENSLAFG00000015757
N
0.892
Q6X9Y1_HORSE
Equus caballus
ENSECAG00000022120
N
0.885
ENSOCUG00000004432
Oryctolagus cuniculus
ENSOCUG00000004432
N
0.883
ENSCAFG00000018550
Canis familiaris
ENSCAFG00000018550
N
0.883
A8E651_BOVIN
Bos taurus
ENSBTAG00000017755
N
0.883
ENSOCUG00000027270
Oryctolagus cuniculus
ENSOCUG00000027270
N
0.883
ENSOCUG00000023130
Oryctolagus cuniculus
ENSOCUG00000023130
N
0.883
Ame_R003420
Ailuropoda melanoleuca
Ame_R003420
N
0.874
ENSCJAG00000013644
Callithrix jacchus
ENSCJAG00000013644
N
0.874
ENSMEUG00000008703
Macropus eugenii
ENSMEUG00000008703
N
0.874
ENSMEUG00000013663
Macropus eugenii
ENSMEUG00000013663
N
0.874
EWSR1
Tursiops truncatus
ENSTTRG00000011881
N
0.874
EWSR1
Echinops telfairi
ENSETEG00000003856
N
0.865
XM_001364468.1
Monodelphis domestica
ENSMODG00000008679
N
0.865
XM_001372950.1
Monodelphis domestica
ENSMODG00000010492
N
0.856
EWSR1
Felis catus
ENSFCAG00000004243
N
0.847
ENSPPYG00000000560
Pongo pygmaeus
ENSPPYG00000000560
N
0.847
ENSPTRG00000034346
Pan troglodytes
ENSPTRG00000034346
N
0.838
EWSR1
Meleagris gallopavo
ENSMGAG00000005282
N
0.838
EWSR1
Ornithorhynchus anatinus
ENSOANG00000001304
N
0.829
EWSR1
Anolis carolinensis
ENSACAG00000009298
N
0.820
EWSR1
Microcebus murinus
ENSMICG00000004264
N
0.802
Q5ZML8_CHICK
Gallus gallus
ENSGALG00000008149
N
0.766
EWSR1
Taeniopygia guttata
ENSTGUG00000010419
N
0.748
ENSCHOG00000009549
Choloepus hoffmanni
ENSCHOG00000009549
N
0.732
AAI08750
Xenopus laevis
AAI08750
N
0.721
AAH97641
Xenopus laevis
AAH97641
N
0.721
AAI08816
Xenopus laevis
AAI08816
N
0.712