CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CBN15354
(
Caenorhabditis brenneri
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
CBN15354
T26243_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBN15354
RanBP ZF
19
50
KEGEWACVDSKCAKVNDESRTICDDCGKAKPR
CBN15354
RanBP ZF
73
101
AEDWVCSKCGNVNWARRRTCNVCNAPKLA
Links
Other
RanBP ZF
family RBPs
Other
Caenorhabditis brenneri
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CJA13414
Caenorhabditis japonica
CJA13414
N
0.885
CRE06678
Caenorhabditis remanei
CRE06678
N
0.869
Y25C1A.8
Caenorhabditis elegans
Y25C1A.8
N
0.787