CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
CJA13414
(
Caenorhabditis japonica
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
CJA13414
T26250_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CJA13414
RanBP ZF
17
48
KEGEWACVDAKCAKVNEESRTVCDECGKAKPR
CJA13414
RanBP ZF
71
98
AEDWVCSKCGNVNWARRKTCNVCNAPKM
Links
Other
RanBP ZF
family RBPs
Other
Caenorhabditis japonica
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CBN15354
Caenorhabditis brenneri
CBN15354
N
0.885
CRE06678
Caenorhabditis remanei
CRE06678
N
0.869
Y25C1A.8
Caenorhabditis elegans
Y25C1A.8
N
0.770
LOAG_07588
Loa loa
LOAG_07588
N
0.705