e_gw.173.96.1 (Nematostella vectensis)
RanBP ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP) IPR001876 e_gw.173.96.1 T27372_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ZRANB2
M259_0.6 		Homo sapiens Sequence logo not available AGGUAA(N)(1-2)AGGUAA SELEX
Cook et al.(2011)
1285_19304800 		0.710
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw.173.96.1 RanBP ZF 4 34
e_gw.173.96.1 RanBP ZF 59 88

Links

Other RanBP ZF family RBPs
Other Nematostella vectensis RBPs

39 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ZRANB2 Gasterosteus aculeatus ENSGACG00000009457 I 0.726
zranb2 Danio rerio ENSDARG00000044332 I 0.726
ZRAB2_CHICK Gallus gallus ENSGALG00000011340 I 0.726
ZRANB2 Anolis carolinensis ENSACAG00000004293 I 0.726
AAH84309 Xenopus laevis AAH84309 I 0.726
zranb2 Xenopus tropicalis ENSXETG00000024108 I 0.726
gw.348.48.1 Branchiostoma floridae gw.348.48.1 I 0.721
ZRANB2 Procavia capensis ENSPCAG00000015159 I 0.710
ZRANB2 Ochotona princeps ENSOPRG00000003839 I 0.710
ZRANB2 Oryctolagus cuniculus ENSOCUG00000004640 I 0.710
ZRANB2 Monodelphis domestica ENSMODG00000000504 I 0.710
Zranb2 Mus musculus ENSMUSG00000028180 I 0.710
ENSPPYG00000001240 Pongo pygmaeus ENSPPYG00000001240 I 0.710
Zranb2 Rattus norvegicus ENSRNOG00000009990 I 0.710
ZRANB2 Tetraodon nigroviridis ENSTNIG00000010498 I 0.710
ZRANB2 Takifugu rubripes ENSTRUG00000003300 I 0.710
ZRANB2 Tursiops truncatus ENSTTRG00000014680 I 0.710
ZRANB2 Spermophilus tridecemlineatus ENSSTOG00000000890 I 0.710
ZRANB2 Sus scrofa ENSSSCG00000003787 I 0.710
ENSMMUG00000017312 Macaca mulatta ENSMMUG00000017312 I 0.710
ZRANB2 Sorex araneus ENSSARG00000009452 I 0.710
ZRANB2 Pan troglodytes ENSPTRG00000000856 I 0.710
ZRANB2 Gorilla gorilla ENSGGOG00000023501 I 0.710
ZRANB2 Canis familiaris ENSCAFG00000020412 I 0.710
ZRANB2 Choloepus hoffmanni ENSCHOG00000004408 I 0.710
A7YWH2_BOVIN Bos taurus ENSBTAG00000002627 I 0.710
CAA65321 Xenopus laevis CAA65321 I 0.710
AAI33785 Xenopus laevis AAI33785 I 0.710
ZRANB2 Myotis lucifugus ENSMLUG00000001762 I 0.710
LOC100411304 Callithrix jacchus ENSCJAG00000006356 I 0.710
ZRANB2 Cavia porcellus ENSCPOG00000007829 I 0.710
ZRANB2 Homo sapiens ENSG00000132485 D 0.710
ZRANB2 Loxodonta africana ENSLAFG00000017760 I 0.710
ENSETEG00000014461 Echinops telfairi ENSETEG00000014461 I 0.710
LOC100053515 Equus caballus ENSECAG00000014173 I 0.710
Zranb2 Dipodomys ordii ENSDORG00000016348 I 0.710
125254 Helobdella robusta 125254 I 0.705
amel4_ncbi_hmm3854 Tribolium castaneum amel4_ncbi_hmm3854 N 0.705
amel4_ncbi_hmm3854 Apis mellifera amel4_ncbi_hmm3854 N 0.705