gw.348.48.1 (Branchiostoma floridae)
RanBP ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP) IPR001876 gw.348.48.1 T27584_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ZRANB2
M259_0.6 		Homo sapiens Sequence logo not available AGGUAA(N)(1-2)AGGUAA SELEX
Cook et al.(2011)
1285_19304800 		0.758
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
gw.348.48.1 RanBP ZF 7 37
gw.348.48.1 RanBP ZF 63 92

Links

Other RanBP ZF family RBPs
Other Branchiostoma floridae RBPs

50 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CAA65321 Xenopus laevis CAA65321 I 0.790
AAI33785 Xenopus laevis AAI33785 I 0.790
ZRANB2 Tetraodon nigroviridis ENSTNIG00000010498 I 0.790
ZRANB2 Takifugu rubripes ENSTRUG00000003300 I 0.790
zranb2 Danio rerio ENSDARG00000044332 I 0.774
zranb2 Xenopus tropicalis ENSXETG00000024108 I 0.774
ZRANB2 Anolis carolinensis ENSACAG00000004293 I 0.774
ZRANB2 Gasterosteus aculeatus ENSGACG00000009457 I 0.774
ZRAB2_CHICK Gallus gallus ENSGALG00000011340 I 0.774
AAH84309 Xenopus laevis AAH84309 I 0.774
amel4_ncbi_hmm3854 Tribolium castaneum amel4_ncbi_hmm3854 N 0.770
amel4_ncbi_hmm3854 Apis mellifera amel4_ncbi_hmm3854 N 0.770
ENSPPYG00000001240 Pongo pygmaeus ENSPPYG00000001240 I 0.758
ZRANB2 Ochotona princeps ENSOPRG00000003839 I 0.758
ZRANB2 Procavia capensis ENSPCAG00000015159 I 0.758
ZRANB2 Oryctolagus cuniculus ENSOCUG00000004640 I 0.758
ENSMMUG00000017312 Macaca mulatta ENSMMUG00000017312 I 0.758
Zranb2 Mus musculus ENSMUSG00000028180 I 0.758
ZRANB2 Pan troglodytes ENSPTRG00000000856 I 0.758
ZRANB2 Sorex araneus ENSSARG00000009452 I 0.758
ZRANB2 Vicugna pacos ENSVPAG00000002940 I 0.758
gw1.1.429.1 Lottia gigantea gw1.1.429.1 N 0.758
ZRANB2 Tursiops truncatus ENSTTRG00000014680 I 0.758
ZRANB2 Spermophilus tridecemlineatus ENSSTOG00000000890 I 0.758
ZRANB2 Myotis lucifugus ENSMLUG00000001762 I 0.758
ZRANB2 Sus scrofa ENSSSCG00000003787 I 0.758
Zranb2 Rattus norvegicus ENSRNOG00000009990 I 0.758
ZRANB2 Monodelphis domestica ENSMODG00000000504 I 0.758
ZRANB2 Loxodonta africana ENSLAFG00000017760 I 0.758
Zranb2 Dipodomys ordii ENSDORG00000016348 I 0.758
LOC100411304 Callithrix jacchus ENSCJAG00000006356 I 0.758
ZRANB2 Choloepus hoffmanni ENSCHOG00000004408 I 0.758
A7YWH2_BOVIN Bos taurus ENSBTAG00000002627 I 0.758
ZRANB2 Canis familiaris ENSCAFG00000020412 I 0.758
LOC100053515 Equus caballus ENSECAG00000014173 I 0.758
ZRANB2 Cavia porcellus ENSCPOG00000007829 I 0.758
ENSETEG00000014461 Echinops telfairi ENSETEG00000014461 I 0.758
ZRANB2 Gorilla gorilla ENSGGOG00000023501 I 0.758
ZRANB2 Homo sapiens ENSG00000132485 D 0.758
ENSETEG00000017849 Echinops telfairi ENSETEG00000017849 I 0.742
estExt_Genewise1Plus.C_900027 Capitella teleta estExt_Genewise1Plus.C_900027 I 0.726
XP_001189132.1 Strongylocentrotus purpuratus XP_001189132.1 N 0.726
XP_785599.1 Strongylocentrotus purpuratus XP_785599.1 N 0.726
DGIL_AUG5s21g11t1 Acyrtosiphon pisum DGIL_AUG5s21g11t1 N 0.726
ENSETEG00000015825 Echinops telfairi ENSETEG00000015825 I 0.726
e_gw.173.96.1 Nematostella vectensis e_gw.173.96.1 I 0.721
BGIBMGA007567 Bombyx mori BGIBMGA007567 N 0.721
XP_002165332.1 Hydra magnipapillata XP_002165332.1 N 0.721
PHUM217580 Pediculus humanus PHUM217580 N 0.710
e_gw1.17.447.1 Daphnia pulex e_gw1.17.447.1 N 0.710