estExt_Genewise1Plus.C_900027 (Capitella teleta)
RanBP ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP) IPR001876 estExt_Genewise1Plus.C_900027 T27438_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ZRANB2
M259_0.6 		Homo sapiens Sequence logo not available AGGUAA(N)(1-2)AGGUAA SELEX
Cook et al.(2011)
1285_19304800 		0.726
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_900027 RanBP ZF 14 44
estExt_Genewise1Plus.C_900027 RanBP ZF 68 97

Links

Other RanBP ZF family RBPs
Other Capitella teleta RBPs

46 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSCSAVG00000000864 Ciona savignyi ENSCSAVG00000000864 N 0.754
gw1.1.429.1 Lottia gigantea gw1.1.429.1 N 0.742
zranb2 Danio rerio ENSDARG00000044332 I 0.742
ZRAB2_CHICK Gallus gallus ENSGALG00000011340 I 0.742
ZRANB2 Tetraodon nigroviridis ENSTNIG00000010498 I 0.742
zranb2 Xenopus tropicalis ENSXETG00000024108 I 0.742
ZRANB2 Takifugu rubripes ENSTRUG00000003300 I 0.742
ZRANB2 Anolis carolinensis ENSACAG00000004293 I 0.742
ZRANB2 Gasterosteus aculeatus ENSGACG00000009457 I 0.742
AAH84309 Xenopus laevis AAH84309 I 0.742
XP_785599.1 Strongylocentrotus purpuratus XP_785599.1 N 0.738
XP_001189132.1 Strongylocentrotus purpuratus XP_001189132.1 N 0.738
ZRANB2 Procavia capensis ENSPCAG00000015159 I 0.726
ENSPPYG00000001240 Pongo pygmaeus ENSPPYG00000001240 I 0.726
ZRANB2 Ochotona princeps ENSOPRG00000003839 I 0.726
Zranb2 Mus musculus ENSMUSG00000028180 I 0.726
ZRANB2 Pan troglodytes ENSPTRG00000000856 I 0.726
ZRANB2 Oryctolagus cuniculus ENSOCUG00000004640 I 0.726
ZRANB2 Sorex araneus ENSSARG00000009452 I 0.726
ZRANB2 Vicugna pacos ENSVPAG00000002940 I 0.726
gw.348.48.1 Branchiostoma floridae gw.348.48.1 I 0.726
ZRANB2 Tursiops truncatus ENSTTRG00000014680 I 0.726
ZRANB2 Spermophilus tridecemlineatus ENSSTOG00000000890 I 0.726
ZRANB2 Monodelphis domestica ENSMODG00000000504 I 0.726
ZRANB2 Sus scrofa ENSSSCG00000003787 I 0.726
Zranb2 Rattus norvegicus ENSRNOG00000009990 I 0.726
ENSMMUG00000017312 Macaca mulatta ENSMMUG00000017312 I 0.726
ZRANB2 Cavia porcellus ENSCPOG00000007829 I 0.726
CAA65321 Xenopus laevis CAA65321 I 0.726
LOC100411304 Callithrix jacchus ENSCJAG00000006356 I 0.726
ZRANB2 Choloepus hoffmanni ENSCHOG00000004408 I 0.726
A7YWH2_BOVIN Bos taurus ENSBTAG00000002627 I 0.726
ZRANB2 Canis familiaris ENSCAFG00000020412 I 0.726
LOC100053515 Equus caballus ENSECAG00000014173 I 0.726
Zranb2 Dipodomys ordii ENSDORG00000016348 I 0.726
ZRANB2 Gorilla gorilla ENSGGOG00000023501 I 0.726
ZRANB2 Loxodonta africana ENSLAFG00000017760 I 0.726
ZRANB2 Myotis lucifugus ENSMLUG00000001762 I 0.726
ENSETEG00000014461 Echinops telfairi ENSETEG00000014461 I 0.726
AAI33785 Xenopus laevis AAI33785 I 0.726
ZRANB2 Homo sapiens ENSG00000132485 D 0.726
amel4_ncbi_hmm3854 Tribolium castaneum amel4_ncbi_hmm3854 N 0.721
amel4_ncbi_hmm3854 Apis mellifera amel4_ncbi_hmm3854 N 0.721
e_gw1.17.447.1 Daphnia pulex e_gw1.17.447.1 N 0.710
ENSETEG00000017849 Echinops telfairi ENSETEG00000017849 I 0.710
125254 Helobdella robusta 125254 I 0.705