CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Glyma07g11510.1
(
Glycine max
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
Glyma07g11510.1
T27540_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Glyma07g11510.1
RanBP ZF
2
31
KKGDWMCPKCNFMNFSRNTQCLNCKEDKPK
Glyma07g11510.1
RanBP ZF
41
69
KPGDWTCPECNYLNFARNRLCLECKIEGP
Glyma07g11510.1
RanBP ZF
81
109
KKGDWTCPQCGFMNYARNTKCLRCPETRP
Glyma07g11510.1
RanBP ZF
113
141
PGDWNCPGCGFMNFASKMKCLHCQEPNPS
Glyma07g11510.1
RanBP ZF
146
174
SGDWSCPKCDFYNYARNMACLKCNAERPK
Links
Other
RanBP ZF
family RBPs
Other
Glycine max
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Glyma09g30770.1
Glycine max
Glyma09g30770.1
N
0.891
Medtr6g083530
Medicago truncatula
Medtr6g083530
N
0.743