AMAG_02172 (Allomyces macrogynus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AMAG_02172 T27968_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AMAG_02172T0 RRM 247 317

Links

Other RRM family RBPs
Other Allomyces macrogynus RBPs

88 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AMAG_00661 Allomyces macrogynus AMAG_00661 N 0.986
VDBG_02138 Verticillium albo atrum VDBG_02138 N 0.775
VDAG_02606 Verticillium dahliae VDAG_02606 N 0.775
e_gw1.4.2113.1 Pleurotus ostreatus e_gw1.4.2113.1 N 0.775
FGSG_04479 Fusarium graminearum FGSG_04479 N 0.761
fgenesh1_pm.sca_11_chr8_3_0000173 Nectria haematococca fgenesh1_pm.sca_11_chr8_3_0000173 N 0.761
fgenesh1_pm.C_scaffold_1000049 Schizophyllum commune fgenesh1_pm.C_scaffold_1000049 N 0.761
e_gw1.11.236.1 Trichoderma atroviride e_gw1.11.236.1 N 0.761
e_gww2.22.65.1 Phanerochaete chrysosporium e_gww2.22.65.1 N 0.761
estExt_fgenesh2_kg.C_140159 Agaricus bisporus estExt_fgenesh2_kg.C_140159 N 0.761
fgenesh1_pm.C_scaffold_3000471 Trichoderma virens fgenesh1_pm.C_scaffold_3000471 N 0.746
GLRG_06614 Colletotrichum graminicola GLRG_06614 N 0.746
FVEG_11166 Fusarium verticillioides FVEG_11166 N 0.746
estExt_GeneWisePlus.C_270056 Trichoderma reesei estExt_GeneWisePlus.C_270056 N 0.746
FOXG_13736 Fusarium oxysporum FOXG_13736 N 0.746
estExt_fgenesh3_pg.C_910016 Postia placenta estExt_fgenesh3_pg.C_910016 N 0.746
e_gww1.4.788.1 Laccaria bicolor e_gww1.4.788.1 N 0.746
SPPG_03169 Spizellomyces punctatus SPPG_03169 N 0.746
fgenesh3_kg.4__300__1748_1_CCOZ_CCPA_CCPB_CCPC_EXTA Heterobasidion annosum fgenesh3_kg.4__300__1748_1_CCOZ_CCPA_CCPB_CCPC_EXTA N 0.746
estExt_Genewise1Plus.C_11662 Tremella mesenterica estExt_Genewise1Plus.C_11662 N 0.732
fgenesh2_pm.4_#_1016 Serpula lacrymans fgenesh2_pm.4_#_1016 N 0.732
PTSG_07932 Salpingoeca rosetta PTSG_07932 N 0.732
PHUM268300 Pediculus humanus PHUM268300 N 0.732
CNBG_1409 Cryptococcus neoformans CNBG_1409 N 0.732
MGG_10681 Magnaporthe oryzae MGG_10681 N 0.718
GSTUMT00009813001 Tuber melanosporum GSTUMT00009813001 N 0.718
e_gw1.20.215.1 Phycomyces blakesleeanus e_gw1.20.215.1 N 0.718
PPIL4 Meleagris gallopavo ENSMGAG00000012596 N 0.718
e_gw.42.57.1 Nematostella vectensis e_gw.42.57.1 N 0.718
PPIL4 Gallus gallus ENSGALG00000012364 N 0.718
ENSOANG00000001063 Ornithorhynchus anatinus ENSOANG00000001063 N 0.718
BC1G_10007 Botrytis cinerea BC1G_10007 N 0.718
ppil4 Xenopus tropicalis ENSXETG00000021385 N 0.704
PPIL4 Takifugu rubripes ENSTRUG00000006670 N 0.704
PPIL4 Tursiops truncatus ENSTTRG00000006014 N 0.704
PPIL4 Vicugna pacos ENSVPAG00000005157 N 0.704
NCU10166 Neurospora crassa NCU10166 N 0.704
cyp6 Schizosaccharomyces pombe SPBC17G9.05 N 0.704
fgeneshTA2_pg.C_scaffold_8000290 Trichoplax adhaerens fgeneshTA2_pg.C_scaffold_8000290 N 0.704
AB03196.1 Alternaria brassicicola AB03196.1 N 0.704
EAT81165.2 Phaeosphaeria nodorum EAT81165.2 N 0.704
Ame_R008665 Ailuropoda melanoleuca Ame_R008665 N 0.704
Pa_2_13850 Podospora anserina Pa_2_13850 N 0.704
Pc21g11960 Penicillium chrysogenum Pc21g11960 N 0.704
gw1.1.256.1 Neurospora tetrasperma gw1.1.256.1 N 0.704
PPIL4 Tetraodon nigroviridis ENSTNIG00000002706 N 0.704
estExt_fgenesh1_kg.C_40083 Melampsora laricis populina estExt_fgenesh1_kg.C_40083 N 0.704
estExt_Genewise1.C_30053 Myceliophthora thermophila estExt_Genewise1.C_30053 N 0.704
estExt_Genewise1Plus.C_12820 Neurospora discreta estExt_Genewise1Plus.C_12820 N 0.704
estExt_Genewise1Plus.C_chr_40303 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_40303 N 0.704
estExt_fgenesh1_kg.C_170006 Cochliobolus heterostrophus C5 estExt_fgenesh1_kg.C_170006 N 0.704
PPIL4 Otolemur garnettii ENSOGAG00000014153 N 0.704
AFLA_071340 Aspergillus flavus CADAFLAG00008558 N 0.704
UM03490 Ustilago maydis UM03490 N 0.704
TRV_03115 Trichophyton verrucosum TRV_03115 N 0.704
AO090038000594 Aspergillus oryzae CADAORAG00009343 N 0.704
PPIL4 Anolis carolinensis ENSACAG00000006936 N 0.704
PPIL4 Cavia porcellus ENSCPOG00000014614 N 0.704
Q6JDI1_CANFA Canis familiaris ENSCAFG00000000379 N 0.704
A6QP53_BOVIN Bos taurus ENSBTAG00000016980 N 0.704
TERG_06028 Trichophyton rubrum TERG_06028 N 0.704
TEQG_07016 Trichophyton equinum TEQG_07016 N 0.704
MGYG_05886 Microsporum gypseum MGYG_05886 N 0.704
MCYG_06073 Microsporum canis MCYG_06073 N 0.704
CAOG_07850 Capsaspora owczarzaki CAOG_07850 N 0.704
PGTG_10482 Puccinia graminis PGTG_10482 N 0.704
PGTG_14680 Puccinia graminis PGTG_14680 N 0.704
SNOG_11457 Stagonospora nodorum SNOG_11457 N 0.704
PTRG_04608 Pyrenophora tritici repentis PTRG_04608 N 0.704
PPIL4 Equus caballus ENSECAG00000021819 N 0.704
PPIL4 Homo sapiens ENSG00000131013 N 0.704
PPIL4 Procavia capensis ENSPCAG00000008203 N 0.704
PPIL4 Ochotona princeps ENSOPRG00000005619 N 0.704
ARB_04672 Arthroderma benhamiae ARB_04672 N 0.704
PPIL4 Pan troglodytes ENSPTRG00000018692 N 0.704
PPIL4 Pteropus vampyrus ENSPVAG00000000746 N 0.704
PPIL4 Sorex araneus ENSSARG00000011244 N 0.704
Ppil4 Rattus norvegicus ENSRNOG00000015552 N 0.704
PPIL4 Oryctolagus cuniculus ENSOCUG00000007696 N 0.704
Ppil4 Mus musculus ENSMUSG00000015757 N 0.704
PPIL4 Loxodonta africana ENSLAFG00000026804 N 0.704
PPIL4 Gorilla gorilla ENSGGOG00000009686 N 0.704
PPIL4 Gasterosteus aculeatus ENSGACG00000006639 N 0.704
PPIL4 Microcebus murinus ENSMICG00000006287 N 0.704
PPIL4 Myotis lucifugus ENSMLUG00000002766 N 0.704
PPIL4 Monodelphis domestica ENSMODG00000016825 N 0.704
PPIL4 Macaca mulatta ENSMMUG00000023067 N 0.704
PPIL4 Taeniopygia guttata ENSTGUG00000010655 N 0.704